Difference between revisions of "TSS:Hg 52042.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENST00000502252.5:0 ENST00000503821.5:0 uc011bzg.4:0 uc062wjs.1:0 AK304038:0 AK297675:0 AF133845:13 BC110451:13 ENST00000610355.4:-29 ENST00000504584.1:...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |CRN= | ||
| + | |Lrp4= | ||
| + | |PEE5= | ||
| + | |TMPRSS10= | ||
|all_trans=ENST00000502252.5:0 ENST00000503821.5:0 uc011bzg.4:0 uc062wjs.1:0 AK304038:0 AK297675:0 AF133845:13 BC110451:13 ENST00000610355.4:-29 ENST00000504584.1:-29 ENST00000502726.5:-29 NM_006587:-29 NM_001278585:-29 NM_001278586:-29 uc032tif.2:-29 uc011bzh.3:-29 uc003gxn.6:-29 AK304466:-29 BX648285:-29 ENST00000273857.8:106 ENST00000505909.5:106 uc003gxm.5:106 uc062wjp.1:106 | |all_trans=ENST00000502252.5:0 ENST00000503821.5:0 uc011bzg.4:0 uc062wjs.1:0 AK304038:0 AK297675:0 AF133845:13 BC110451:13 ENST00000610355.4:-29 ENST00000504584.1:-29 ENST00000502726.5:-29 NM_006587:-29 NM_001278585:-29 NM_001278586:-29 uc032tif.2:-29 uc011bzh.3:-29 uc003gxn.6:-29 AK304466:-29 BX648285:-29 ENST00000273857.8:106 ENST00000505909.5:106 uc003gxm.5:106 uc062wjp.1:106 | ||
|chr=chr4 | |chr=chr4 | ||
| Line 6: | Line 10: | ||
|distance_to_tss=40 | |distance_to_tss=40 | ||
|end=47838077 | |end=47838077 | ||
| + | |end_of_center_position=47838066 | ||
|entrez_id=10699 | |entrez_id=10699 | ||
|gc_percent=0.532338 | |gc_percent=0.532338 | ||
| − | |gene_alias=ATC2 | + | |gene_alias=ATC2 |
|gene_description="corin, serine peptidase" | |gene_description="corin, serine peptidase" | ||
|gene_id=10699 | |gene_id=10699 | ||
| Line 24: | Line 29: | ||
|species=human | |species=human | ||
|start=47838054 | |start=47838054 | ||
| + | |start_of_center_position=47838065 | ||
|strand=- | |strand=- | ||
|transcript_name=ENST00000502252.5 ENST00000503821.5 uc011bzg.4 uc062wjs.1 AK304038 AK297675 | |transcript_name=ENST00000502252.5 ENST00000503821.5 uc011bzg.4 uc062wjs.1 AK304038 AK297675 | ||
Revision as of 17:02, 13 May 2019
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 47838065 |
|---|---|
| End of the center position in the TSS region: | 47838066 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000502252.5 ENST00000503821.5 uc011bzg.4 uc062wjs.1 AK304038 AK297675 |
|---|---|
| Distance: | 0 |
| Num_trans: | 23 |
| All_trans: | ENST00000502252.5:0 ENST00000503821.5:0 uc011bzg.4:0 uc062wjs.1:0 AK304038:0 AK297675:0 AF133845:13 BC110451:13 ENST00000610355.4:-29 ENST00000504584.1:-29 ENST00000502726.5:-29 NM_006587:-29 NM_001278585:-29 NM_001278586:-29 uc032tif.2:-29 uc011bzh.3:-29 uc003gxn.6:-29 AK304466:-29 BX648285:-29 ENST00000273857.8:106 ENST00000505909.5:106 uc003gxm.5:106 uc062wjp.1:106 |
TATA-Box annotation
| Distance to TSS: | 40 |
|---|---|
| Nearest PromoterID: | NM_001278585 |
| Entrez ID: | 10699 |
| Nearest Unigene: | Hs.518618 |
| Nearest Refseq: | NM_006587 |
| Nearest Ensembl: | ENSG00000145244 |
| Gene Name: | "corin, serine peptidase" |
| Gene Alias: | ATC2 |
| Gene Description: | "corin, serine peptidase" |
| Gene Type: | protein-coding |
| CpG%: | 0.04 |
| GC%: | 0.532338 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
