Difference between revisions of "TSS:Hg 52043.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENST00000610355.4:0 ENST00000504584.1:0 ENST00000502726.5:0 NM_006587:0 NM_001278585:0 NM_001278586:0 uc032tif.2:0 uc011bzh.3:0 uc003gxn.6:0 AK304466:0...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |CRN= | ||
| + | |Lrp4= | ||
| + | |PEE5= | ||
| + | |TMPRSS10= | ||
|all_trans=ENST00000610355.4:0 ENST00000504584.1:0 ENST00000502726.5:0 NM_006587:0 NM_001278585:0 NM_001278586:0 uc032tif.2:0 uc011bzh.3:0 uc003gxn.6:0 AK304466:0 BX648285:0 ENST00000502252.5:24 uc011bzg.4:24 AK304038:24 ENST00000503821.5:29 uc062wjs.1:29 AK297675:29 AF133845:54 BC110451:54 ENST00000273857.8:147 ENST00000505909.5:147 uc003gxm.5:147 uc062wjp.1:147 | |all_trans=ENST00000610355.4:0 ENST00000504584.1:0 ENST00000502726.5:0 NM_006587:0 NM_001278585:0 NM_001278586:0 uc032tif.2:0 uc011bzh.3:0 uc003gxn.6:0 AK304466:0 BX648285:0 ENST00000502252.5:24 uc011bzg.4:24 AK304038:24 ENST00000503821.5:29 uc062wjs.1:29 AK297675:29 AF133845:54 BC110451:54 ENST00000273857.8:147 ENST00000505909.5:147 uc003gxm.5:147 uc062wjp.1:147 | ||
|chr=chr4 | |chr=chr4 | ||
| Line 6: | Line 10: | ||
|distance_to_tss=3 | |distance_to_tss=3 | ||
|end=47838111 | |end=47838111 | ||
| + | |end_of_center_position=47838104 | ||
|entrez_id=10699 | |entrez_id=10699 | ||
|gc_percent=0.567164 | |gc_percent=0.567164 | ||
| − | |gene_alias=ATC2 | + | |gene_alias=ATC2 |
|gene_description="corin, serine peptidase" | |gene_description="corin, serine peptidase" | ||
|gene_id=10699 | |gene_id=10699 | ||
| Line 24: | Line 29: | ||
|species=human | |species=human | ||
|start=47838095 | |start=47838095 | ||
| + | |start_of_center_position=47838103 | ||
|strand=- | |strand=- | ||
|transcript_name=ENST00000610355.4 ENST00000504584.1 ENST00000502726.5 NM_006587 NM_001278585 NM_001278586 uc032tif.2 uc011bzh.3 uc003gxn.6 AK304466 BX648285 | |transcript_name=ENST00000610355.4 ENST00000504584.1 ENST00000502726.5 NM_006587 NM_001278585 NM_001278586 uc032tif.2 uc011bzh.3 uc003gxn.6 AK304466 BX648285 | ||
Revision as of 17:02, 13 May 2019
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 47838103 |
|---|---|
| End of the center position in the TSS region: | 47838104 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000610355.4 ENST00000504584.1 ENST00000502726.5 NM_006587 NM_001278585 NM_001278586 uc032tif.2 uc011bzh.3 uc003gxn.6 AK304466 BX648285 |
|---|---|
| Distance: | 0 |
| Num_trans: | 23 |
| All_trans: | ENST00000610355.4:0 ENST00000504584.1:0 ENST00000502726.5:0 NM_006587:0 NM_001278585:0 NM_001278586:0 uc032tif.2:0 uc011bzh.3:0 uc003gxn.6:0 AK304466:0 BX648285:0 ENST00000502252.5:24 uc011bzg.4:24 AK304038:24 ENST00000503821.5:29 uc062wjs.1:29 AK297675:29 AF133845:54 BC110451:54 ENST00000273857.8:147 ENST00000505909.5:147 uc003gxm.5:147 uc062wjp.1:147 |
TATA-Box annotation
| Distance to TSS: | 3 |
|---|---|
| Nearest PromoterID: | NM_001278585 |
| Entrez ID: | 10699 |
| Nearest Unigene: | Hs.518618 |
| Nearest Refseq: | NM_006587 |
| Nearest Ensembl: | ENSG00000145244 |
| Gene Name: | "corin, serine peptidase" |
| Gene Alias: | ATC2 |
| Gene Description: | "corin, serine peptidase" |
| Gene Type: | protein-coding |
| CpG%: | 0.045 |
| GC%: | 0.567164 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
