Difference between revisions of "TSS:Hg 5786.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=NM_002529:5 NM_001012331:5 ENST00000524377.5:20 ENST00000358660.3:20 uc001fqh.2:20 uc009wsk.2:20 AK312704:20 AK290759:20 BC144239:-24 BC136554:-24 ENST0...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |TRK= | ||
| + | |TRK1= | ||
| + | |TRKA= | ||
| + | |Trk-A= | ||
|all_trans=NM_002529:5 NM_001012331:5 ENST00000524377.5:20 ENST00000358660.3:20 uc001fqh.2:20 uc009wsk.2:20 AK312704:20 AK290759:20 BC144239:-24 BC136554:-24 ENST00000533630.1:39 uc057mdl.1:39 ENST00000368196.7:-44 uc001fqi.2:-44 M23102:-44 KJ534902:61 KJ534903:61 BC062580:62 | |all_trans=NM_002529:5 NM_001012331:5 ENST00000524377.5:20 ENST00000358660.3:20 uc001fqh.2:20 uc009wsk.2:20 AK312704:20 AK290759:20 BC144239:-24 BC136554:-24 ENST00000533630.1:39 uc057mdl.1:39 ENST00000368196.7:-44 uc001fqi.2:-44 M23102:-44 KJ534902:61 KJ534903:61 BC062580:62 | ||
|chr=chr1 | |chr=chr1 | ||
| Line 6: | Line 10: | ||
|distance_to_tss=-13 | |distance_to_tss=-13 | ||
|end=156860874 | |end=156860874 | ||
| + | |end_of_center_position=156860867 | ||
|entrez_id=4914 | |entrez_id=4914 | ||
|gc_percent=0.761194 | |gc_percent=0.761194 | ||
| − | |gene_alias=MTC | + | |gene_alias=MTC |
|gene_description=neurotrophic receptor tyrosine kinase 1 | |gene_description=neurotrophic receptor tyrosine kinase 1 | ||
|gene_id=4914 | |gene_id=4914 | ||
| Line 22: | Line 27: | ||
|nearest_unigene=Hs.406293 | |nearest_unigene=Hs.406293 | ||
|num_trans=18 | |num_trans=18 | ||
| + | |p140-TrkA= | ||
|species=human | |species=human | ||
|start=156860858 | |start=156860858 | ||
| + | |start_of_center_position=156860866 | ||
|strand=+ | |strand=+ | ||
|transcript_name=NM_002529 NM_001012331 | |transcript_name=NM_002529 NM_001012331 | ||
Revision as of 10:26, 11 May 2019
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 156860866 |
|---|---|
| End of the center position in the TSS region: | 156860867 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | NM_002529 NM_001012331 |
|---|---|
| Distance: | 5 |
| Num_trans: | 18 |
| All_trans: | NM_002529:5 NM_001012331:5 ENST00000524377.5:20 ENST00000358660.3:20 uc001fqh.2:20 uc009wsk.2:20 AK312704:20 AK290759:20 BC144239:-24 BC136554:-24 ENST00000533630.1:39 uc057mdl.1:39 ENST00000368196.7:-44 uc001fqi.2:-44 M23102:-44 KJ534902:61 KJ534903:61 BC062580:62 |
TATA-Box annotation
| Distance to TSS: | -13 |
|---|---|
| Nearest PromoterID: | NM_001012331 |
| Entrez ID: | 4914 |
| Nearest Unigene: | Hs.406293 |
| Nearest Refseq: | NM_002529 |
| Nearest Ensembl: | ENSG00000198400 |
| Gene Name: | "neurotrophic tyrosine kinase, receptor, type 1" |
| Gene Alias: | MTC |
| Gene Description: | neurotrophic receptor tyrosine kinase 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.12 |
| GC%: | 0.761194 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
