Difference between revisions of "TSS:Hg 118085.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.06 |distance_to_tss=1083 |entrez_id=100033819 |gc_percent=0.641791 |gene_alias=MIRN675|hsa-mir-675 |gene_description=microRNA 675 |gene_name=MIR675...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=BC010185:158 BC106079:217 BC106078:-222 ENST00000442037.5:-425 uc021qbx.3:-425 | ||
| + | |chr=chr11 | ||
|cpg_percent=0.06 | |cpg_percent=0.06 | ||
| + | |distance=158 | ||
|distance_to_tss=1083 | |distance_to_tss=1083 | ||
| + | |end=1995766 | ||
|entrez_id=100033819 | |entrez_id=100033819 | ||
|gc_percent=0.641791 | |gc_percent=0.641791 | ||
|gene_alias=MIRN675|hsa-mir-675 | |gene_alias=MIRN675|hsa-mir-675 | ||
|gene_description=microRNA 675 | |gene_description=microRNA 675 | ||
| − | |gene_name= | + | |gene_id=283120 |
| + | |gene_name="H19, imprinted maternally expressed transcript (non-protein coding)" | ||
| + | |gene_source=HGNC:4713 | ||
| + | |gene_symbol=H19 | ||
| + | |gene_synonyms=ASM ASM1 D11S813E LINC00008 NCRNA00008 | ||
|gene_type=ncRNA | |gene_type=ncRNA | ||
| + | |hgnc_mgi_id=HGNC:4713 | ||
| + | |hsa-mir-675= | ||
|nearest_ensembl=ENSG00000130600 | |nearest_ensembl=ENSG00000130600 | ||
|nearest_promoter_id=NR_030533 | |nearest_promoter_id=NR_030533 | ||
|nearest_refseq=NR_030533 | |nearest_refseq=NR_030533 | ||
|nearest_unigene= | |nearest_unigene= | ||
| + | |num_trans=5 | ||
| + | |species=human | ||
| + | |start=1995730 | ||
| + | |strand=- | ||
| + | |transcript_name=BC010185 | ||
| + | |tss_classification=no | ||
|tss_id=hg_118085.1 | |tss_id=hg_118085.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 06:35, 9 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | BC010185 |
|---|---|
| Distance: | 158 |
| Num_trans: | 5 |
| All_trans: | BC010185:158 BC106079:217 BC106078:-222 ENST00000442037.5:-425 uc021qbx.3:-425 |
TATA-Box annotation
| Distance to TSS: | 1083 |
|---|---|
| Nearest PromoterID: | NR_030533 |
| Entrez ID: | 100033819 |
| Nearest Unigene: | |
| Nearest Refseq: | NR_030533 |
| Nearest Ensembl: | ENSG00000130600 |
| Gene Name: | "H19, imprinted maternally expressed transcript (non-protein coding)" |
| Gene Alias: | MIRN675 |
| Gene Description: | microRNA 675 |
| Gene Type: | ncRNA |
| CpG%: | 0.06 |
| GC%: | 0.641791 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
