Difference between revisions of "TSS:Hg 101766.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.07 |distance_to_tss=1 |entrez_id=5535 |gc_percent=0.701493 |gene_alias=PPP3RL |gene_description="protein phosphatase 3 regulatory subunit B, beta" |...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=ENST00000374806.1:0 NM_147180:0 uc004bbr.3:0 BC030595:0 AK310471:-16 AF400667:27 AK057524:36 AK302547:36 BC066299:57 JF432717:66 KJ891875:66 AF085237:75 AF145026:75 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.07 | |cpg_percent=0.07 | ||
| + | |distance=0 | ||
|distance_to_tss=1 | |distance_to_tss=1 | ||
| + | |end=101595005 | ||
|entrez_id=5535 | |entrez_id=5535 | ||
|gc_percent=0.701493 | |gc_percent=0.701493 | ||
|gene_alias=PPP3RL | |gene_alias=PPP3RL | ||
|gene_description="protein phosphatase 3 regulatory subunit B, beta" | |gene_description="protein phosphatase 3 regulatory subunit B, beta" | ||
| − | |gene_name=PPP3R2 | + | |gene_id=5535 |
| + | |gene_name="protein phosphatase 3 regulatory subunit B, beta" | ||
| + | |gene_source=HGNC:9318 | ||
| + | |gene_symbol=PPP3R2 | ||
| + | |gene_synonyms=PPP3RL | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:9318 | ||
|nearest_ensembl=ENSG00000188386 | |nearest_ensembl=ENSG00000188386 | ||
|nearest_promoter_id=NM_147180 | |nearest_promoter_id=NM_147180 | ||
|nearest_refseq=NM_147180 | |nearest_refseq=NM_147180 | ||
|nearest_unigene=Hs.151167 | |nearest_unigene=Hs.151167 | ||
| + | |num_trans=13 | ||
| + | |species=human | ||
| + | |start=101594995 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000374806.1 NM_147180 uc004bbr.3 BC030595 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_101766.1 | |tss_id=hg_101766.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=Q96LZ3 | ||
}} | }} | ||
Revision as of 18:57, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000374806.1 NM_147180 uc004bbr.3 BC030595 |
|---|---|
| Distance: | 0 |
| Num_trans: | 13 |
| All_trans: | ENST00000374806.1:0 NM_147180:0 uc004bbr.3:0 BC030595:0 AK310471:-16 AF400667:27 AK057524:36 AK302547:36 BC066299:57 JF432717:66 KJ891875:66 AF085237:75 AF145026:75 |
TATA-Box annotation
| Distance to TSS: | 1 |
|---|---|
| Nearest PromoterID: | NM_147180 |
| Entrez ID: | 5535 |
| Nearest Unigene: | Hs.151167 |
| Nearest Refseq: | NM_147180 |
| Nearest Ensembl: | ENSG00000188386 |
| Gene Name: | "protein phosphatase 3 regulatory subunit B, beta" |
| Gene Alias: | PPP3RL |
| Gene Description: | "protein phosphatase 3 regulatory subunit B, beta" |
| Gene Type: | protein-coding |
| CpG%: | 0.07 |
| GC%: | 0.701493 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
