Difference between revisions of "TSS:Hg 121146.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.125 |distance_to_tss=-42 |entrez_id=4926 |gc_percent=0.686567 |gene_alias=NMP-22|NUMA |gene_description=nuclear mitotic apparatus protein 1 |gene_na...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |NUMA= | ||
| + | |all_trans=ENST00000358965.10:0 ENST00000537217.5:0 ENST00000540843.5:0 ENST00000543937.5:0 ENST00000368959.9:0 ENST00000366394.7:0 ENST00000541641.5:0 ENST00000537905.5:0 ENST00000546131.1:0 NR_104476:0 uc001orm.3:0 uc058exp.1:0 uc058exq.1:0 uc058ext.1:0 uc058eya.1:0 uc058eyc.1:0 uc058eyd.1:0 uc058eye.1:0 uc058eyh.1:0 AB210007:0 Z11584:0 Z11583:0 AK307577:0 BC103765:0 BC027493:0 BC043499:0 AB621824:0 ENST00000535111.5:10 uc058eyf.1:10 ENST00000541719.5:42 uc058eyb.1:42 ENST00000351960.10:84 uc001ork.3:84 BC004165:84 ENST00000393695.7:-128 uc001orl.3:-128 BC068539:-133 ENST00000613205.4:-134 ENST00000543450.1:-134 NM_001286561:-134 NM_006185:-134 uc058exi.1:-134 uc058eyi.1:-134 | ||
| + | |chr=chr11 | ||
|cpg_percent=0.125 | |cpg_percent=0.125 | ||
| + | |distance=0 | ||
|distance_to_tss=-42 | |distance_to_tss=-42 | ||
| + | |end=72080559 | ||
|entrez_id=4926 | |entrez_id=4926 | ||
|gc_percent=0.686567 | |gc_percent=0.686567 | ||
|gene_alias=NMP-22|NUMA | |gene_alias=NMP-22|NUMA | ||
|gene_description=nuclear mitotic apparatus protein 1 | |gene_description=nuclear mitotic apparatus protein 1 | ||
| − | |gene_name=NUMA1 | + | |gene_id=4926 |
| + | |gene_name=nuclear mitotic apparatus protein 1 | ||
| + | |gene_source=HGNC:8059 | ||
| + | |gene_symbol=NUMA1 | ||
| + | |gene_synonyms= | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:8059 | ||
|nearest_ensembl=ENSG00000137497 | |nearest_ensembl=ENSG00000137497 | ||
|nearest_promoter_id=NR_104476 | |nearest_promoter_id=NR_104476 | ||
|nearest_refseq=NM_006185 | |nearest_refseq=NM_006185 | ||
|nearest_unigene=Hs.325978 | |nearest_unigene=Hs.325978 | ||
| + | |num_trans=43 | ||
| + | |species=human | ||
| + | |start=72080472 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000358965.10 ENST00000537217.5 ENST00000540843.5 ENST00000543937.5 ENST00000368959.9 ENST00000366394.7 ENST00000541641.5 ENST00000537905.5 ENST00000546131.1 NR_104476 uc001orm.3 uc058exp.1 uc058exq.1 uc058ext.1 uc058eya.1 uc058eyc.1 uc058eyd.1 uc058eye.1 uc058eyh.1 AB210007 Z11584 Z11583 AK307577 BC103765 BC027493 BC043499 AB621824 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_121146.1 | |tss_id=hg_121146.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=A0A024R5M9 F5GWK2 F5H073 F5H0Z7 F5H6Y5 F5H7R5 F8W6T3 G1UI36 Q14980 Q4LE64 Q86XH4 | ||
}} | }} | ||
Revision as of 08:46, 9 March 2018
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000358965.10 ENST00000537217.5 ENST00000540843.5 ENST00000543937.5 ENST00000368959.9 ENST00000366394.7 ENST00000541641.5 ENST00000537905.5 ENST00000546131.1 NR_104476 uc001orm.3 uc058exp.1 uc058exq.1 uc058ext.1 uc058eya.1 uc058eyc.1 uc058eyd.1 uc058eye.1 uc058eyh.1 AB210007 Z11584 Z11583 AK307577 BC103765 BC027493 BC043499 AB621824 |
|---|---|
| Distance: | 0 |
| Num_trans: | 43 |
| All_trans: | ENST00000358965.10:0 ENST00000537217.5:0 ENST00000540843.5:0 ENST00000543937.5:0 ENST00000368959.9:0 ENST00000366394.7:0 ENST00000541641.5:0 ENST00000537905.5:0 ENST00000546131.1:0 NR_104476:0 uc001orm.3:0 uc058exp.1:0 uc058exq.1:0 uc058ext.1:0 uc058eya.1:0 uc058eyc.1:0 uc058eyd.1:0 uc058eye.1:0 uc058eyh.1:0 AB210007:0 Z11584:0 Z11583:0 AK307577:0 BC103765:0 BC027493:0 BC043499:0 AB621824:0 ENST00000535111.5:10 uc058eyf.1:10 ENST00000541719.5:42 uc058eyb.1:42 ENST00000351960.10:84 uc001ork.3:84 BC004165:84 ENST00000393695.7:-128 uc001orl.3:-128 BC068539:-133 ENST00000613205.4:-134 ENST00000543450.1:-134 NM_001286561:-134 NM_006185:-134 uc058exi.1:-134 uc058eyi.1:-134 |
TATA-Box annotation
| Distance to TSS: | -42 |
|---|---|
| Nearest PromoterID: | NR_104476 |
| Entrez ID: | 4926 |
| Nearest Unigene: | Hs.325978 |
| Nearest Refseq: | NM_006185 |
| Nearest Ensembl: | ENSG00000137497 |
| Gene Name: | nuclear mitotic apparatus protein 1 |
| Gene Alias: | NMP-22 |
| Gene Description: | nuclear mitotic apparatus protein 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.125 |
| GC%: | 0.686567 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
