Difference between revisions of "TSS:Hg 121789.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.005 |distance_to_tss=184 |entrez_id=50507 |gc_percent=0.402985 |gene_alias=KOX|KOX-1|RENOX |gene_description=NADPH oxidase 4 |gene_name=NOX4 |gene_t...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |KOX-1= | ||
| + | |RENOX= | ||
| + | |all_trans=ENST00000528341.5:-172 uc009yvr.4:-172 AK298357:-172 AK311381:-177 NM_001291929:-181 NM_001291927:-418 AK298328:-418 | ||
| + | |chr=chr11 | ||
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
| + | |distance=-172 | ||
|distance_to_tss=184 | |distance_to_tss=184 | ||
| + | |end=89490560 | ||
|entrez_id=50507 | |entrez_id=50507 | ||
|gc_percent=0.402985 | |gc_percent=0.402985 | ||
|gene_alias=KOX|KOX-1|RENOX | |gene_alias=KOX|KOX-1|RENOX | ||
|gene_description=NADPH oxidase 4 | |gene_description=NADPH oxidase 4 | ||
| − | |gene_name=NOX4 | + | |gene_id=50507 |
| + | |gene_name=NADPH oxidase 4 | ||
| + | |gene_source=HGNC:7891 | ||
| + | |gene_symbol=NOX4 | ||
| + | |gene_synonyms=KOX KOX-1 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:7891 | ||
|nearest_ensembl=ENSG00000086991 | |nearest_ensembl=ENSG00000086991 | ||
|nearest_promoter_id=NM_001291929 | |nearest_promoter_id=NM_001291929 | ||
|nearest_refseq=NM_016931 | |nearest_refseq=NM_016931 | ||
|nearest_unigene=Hs.371036 | |nearest_unigene=Hs.371036 | ||
| + | |num_trans=7 | ||
| + | |species=human | ||
| + | |start=89490553 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000528341.5 uc009yvr.4 AK298357 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_121789.1 | |tss_id=hg_121789.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=B7Z529 E9PPP2 | ||
}} | }} | ||
Revision as of 09:14, 9 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000528341.5 uc009yvr.4 AK298357 |
|---|---|
| Distance: | -172 |
| Num_trans: | 7 |
| All_trans: | ENST00000528341.5:-172 uc009yvr.4:-172 AK298357:-172 AK311381:-177 NM_001291929:-181 NM_001291927:-418 AK298328:-418 |
TATA-Box annotation
| Distance to TSS: | 184 |
|---|---|
| Nearest PromoterID: | NM_001291929 |
| Entrez ID: | 50507 |
| Nearest Unigene: | Hs.371036 |
| Nearest Refseq: | NM_016931 |
| Nearest Ensembl: | ENSG00000086991 |
| Gene Name: | NADPH oxidase 4 |
| Gene Alias: | KOX |
| Gene Description: | NADPH oxidase 4 |
| Gene Type: | protein-coding |
| CpG%: | 0.005 |
| GC%: | 0.402985 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
