Difference between revisions of "TSS:Hg 121802.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.03 |distance_to_tss=-100 |entrez_id=50507 |gc_percent=0.577114 |gene_alias=KOX|KOX-1|RENOX |gene_description=NADPH oxidase 4 |gene_name=NOX4 |gene_t...") |
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{{TSSDetail | {{TSSDetail | ||
+ | |KOX-1= | ||
+ | |RENOX= | ||
+ | |all_trans=ENST00000393282.2:94 NM_001143836:94 NM_001291926:94 NM_016931:94 NR_120406:94 uc058gjf.1:94 BC051371:94 ENST00000263317.8:174 uc001pct.4:174 AB041035:174 ENST00000525278.1:265 uc058gje.1:265 ENST00000525196.5:299 uc009yvp.4:299 BC034780:299 ENST00000529343.5:302 uc058gjd.1:302 AF254621:327 ENST00000534731.5:331 ENST00000527626.5:331 uc001pcv.4:331 uc010rtu.3:331 AK291830:331 AK298376:331 BC040105:341 AK311389:366 JF432404:409 KJ893751:409 CU691812:410 ENST00000531342.5:413 ENST00000375979.7:413 uc001pcw.4:413 uc001pcx.4:413 AF261943:413 AJ704725:413 AJ704726:413 AJ704727:413 AJ704728:413 AJ704729:413 AY288918:413 | ||
+ | |chr=chr11 | ||
|cpg_percent=0.03 | |cpg_percent=0.03 | ||
+ | |distance=94 | ||
|distance_to_tss=-100 | |distance_to_tss=-100 | ||
+ | |end=89491671 | ||
|entrez_id=50507 | |entrez_id=50507 | ||
|gc_percent=0.577114 | |gc_percent=0.577114 | ||
|gene_alias=KOX|KOX-1|RENOX | |gene_alias=KOX|KOX-1|RENOX | ||
|gene_description=NADPH oxidase 4 | |gene_description=NADPH oxidase 4 | ||
− | |gene_name=NOX4 | + | |gene_id=50507 |
+ | |gene_name=NADPH oxidase 4 | ||
+ | |gene_source=HGNC:7891 | ||
+ | |gene_symbol=NOX4 | ||
+ | |gene_synonyms=KOX KOX-1 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
+ | |hgnc_mgi_id=HGNC:7891 | ||
|nearest_ensembl=ENSG00000086991 | |nearest_ensembl=ENSG00000086991 | ||
|nearest_promoter_id=NM_016931 | |nearest_promoter_id=NM_016931 | ||
|nearest_refseq=NM_016931 | |nearest_refseq=NM_016931 | ||
|nearest_unigene=Hs.371036 | |nearest_unigene=Hs.371036 | ||
+ | |num_trans=40 | ||
+ | |species=human | ||
+ | |start=89491658 | ||
+ | |strand=- | ||
+ | |transcript_name=ENST00000393282.2 NM_001143836 NM_001291926 NM_016931 NR_120406 uc058gjf.1 BC051371 | ||
+ | |tss_classification=yes | ||
|tss_id=hg_121802.1 | |tss_id=hg_121802.1 | ||
+ | |tss_score=1 | ||
+ | |uniprot_id=Q9NPH5 | ||
}} | }} |
Revision as of 09:15, 9 March 2018
Basic information about the TSS
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Start of the center position in the TSS region: | |
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End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
Transcript_name: | ENST00000393282.2 NM_001143836 NM_001291926 NM_016931 NR_120406 uc058gjf.1 BC051371 |
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Distance: | 94 |
Num_trans: | 40 |
All_trans: | ENST00000393282.2:94 NM_001143836:94 NM_001291926:94 NM_016931:94 NR_120406:94 uc058gjf.1:94 BC051371:94 ENST00000263317.8:174 uc001pct.4:174 AB041035:174 ENST00000525278.1:265 uc058gje.1:265 ENST00000525196.5:299 uc009yvp.4:299 BC034780:299 ENST00000529343.5:302 uc058gjd.1:302 AF254621:327 ENST00000534731.5:331 ENST00000527626.5:331 uc001pcv.4:331 uc010rtu.3:331 AK291830:331 AK298376:331 BC040105:341 AK311389:366 JF432404:409 KJ893751:409 CU691812:410 ENST00000531342.5:413 ENST00000375979.7:413 uc001pcw.4:413 uc001pcx.4:413 AF261943:413 AJ704725:413 AJ704726:413 AJ704727:413 AJ704728:413 AJ704729:413 AY288918:413 |
TATA-Box annotation
Distance to TSS: | -100 |
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Nearest PromoterID: | NM_016931 |
Entrez ID: | 50507 |
Nearest Unigene: | Hs.371036 |
Nearest Refseq: | NM_016931 |
Nearest Ensembl: | ENSG00000086991 |
Gene Name: | NADPH oxidase 4 |
Gene Alias: | KOX |
Gene Description: | NADPH oxidase 4 |
Gene Type: | protein-coding |
CpG%: | 0.03 |
GC%: | 0.577114 |
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |