Personal tools

Difference between revisions of "TSS:Hg 121802.1"

From referenceTSS

Jump to: navigation, search
(Created page with "{{TSSDetail |cpg_percent=0.03 |distance_to_tss=-100 |entrez_id=50507 |gc_percent=0.577114 |gene_alias=KOX|KOX-1|RENOX |gene_description=NADPH oxidase 4 |gene_name=NOX4 |gene_t...")
 
Line 1: Line 1:
 
{{TSSDetail
 
{{TSSDetail
 +
|KOX-1=
 +
|RENOX=
 +
|all_trans=ENST00000393282.2:94 NM_001143836:94 NM_001291926:94 NM_016931:94 NR_120406:94 uc058gjf.1:94 BC051371:94 ENST00000263317.8:174 uc001pct.4:174 AB041035:174 ENST00000525278.1:265 uc058gje.1:265 ENST00000525196.5:299 uc009yvp.4:299 BC034780:299 ENST00000529343.5:302 uc058gjd.1:302 AF254621:327 ENST00000534731.5:331 ENST00000527626.5:331 uc001pcv.4:331 uc010rtu.3:331 AK291830:331 AK298376:331 BC040105:341 AK311389:366 JF432404:409 KJ893751:409 CU691812:410 ENST00000531342.5:413 ENST00000375979.7:413 uc001pcw.4:413 uc001pcx.4:413 AF261943:413 AJ704725:413 AJ704726:413 AJ704727:413 AJ704728:413 AJ704729:413 AY288918:413
 +
|chr=chr11
 
|cpg_percent=0.03
 
|cpg_percent=0.03
 +
|distance=94
 
|distance_to_tss=-100
 
|distance_to_tss=-100
 +
|end=89491671
 
|entrez_id=50507
 
|entrez_id=50507
 
|gc_percent=0.577114
 
|gc_percent=0.577114
 
|gene_alias=KOX|KOX-1|RENOX
 
|gene_alias=KOX|KOX-1|RENOX
 
|gene_description=NADPH oxidase 4
 
|gene_description=NADPH oxidase 4
|gene_name=NOX4
+
|gene_id=50507
 +
|gene_name=NADPH oxidase 4
 +
|gene_source=HGNC:7891
 +
|gene_symbol=NOX4
 +
|gene_synonyms=KOX KOX-1
 
|gene_type=protein-coding
 
|gene_type=protein-coding
 +
|hgnc_mgi_id=HGNC:7891
 
|nearest_ensembl=ENSG00000086991
 
|nearest_ensembl=ENSG00000086991
 
|nearest_promoter_id=NM_016931
 
|nearest_promoter_id=NM_016931
 
|nearest_refseq=NM_016931
 
|nearest_refseq=NM_016931
 
|nearest_unigene=Hs.371036
 
|nearest_unigene=Hs.371036
 +
|num_trans=40
 +
|species=human
 +
|start=89491658
 +
|strand=-
 +
|transcript_name=ENST00000393282.2 NM_001143836 NM_001291926 NM_016931 NR_120406 uc058gjf.1 BC051371
 +
|tss_classification=yes
 
|tss_id=hg_121802.1
 
|tss_id=hg_121802.1
 +
|tss_score=1
 +
|uniprot_id=Q9NPH5
 
}}
 
}}

Revision as of 09:15, 9 March 2018

Basic information about the TSS


TSS ID:hg_121802.1
Species:human
Chr:chr11
TSS Classification:yes
Start:89491658
End:89491671
Strand:-
TSS Score:1
Start of the center position in the TSS region:
End of the center position in the TSS region:



Gene and protein annotation


Transcript_name:ENST00000393282.2 NM_001143836 NM_001291926 NM_016931 NR_120406 uc058gjf.1 BC051371
Distance:94
GeneID:50507
HGNC/MGI_ID:HGNC:7891
UniProt_ID:Q9NPH5
Gene_name:NADPH oxidase 4
Gene_symbol:NOX4
Gene_synonyms:KOX KOX-1
Gene_source:HGNC:7891



Transcript annotation


Transcript_name:ENST00000393282.2 NM_001143836 NM_001291926 NM_016931 NR_120406 uc058gjf.1 BC051371
Distance:94
Num_trans:40
All_trans:ENST00000393282.2:94 NM_001143836:94 NM_001291926:94 NM_016931:94 NR_120406:94 uc058gjf.1:94 BC051371:94 ENST00000263317.8:174 uc001pct.4:174 AB041035:174 ENST00000525278.1:265 uc058gje.1:265 ENST00000525196.5:299 uc009yvp.4:299 BC034780:299 ENST00000529343.5:302 uc058gjd.1:302 AF254621:327 ENST00000534731.5:331 ENST00000527626.5:331 uc001pcv.4:331 uc010rtu.3:331 AK291830:331 AK298376:331 BC040105:341 AK311389:366 JF432404:409 KJ893751:409 CU691812:410 ENST00000531342.5:413 ENST00000375979.7:413 uc001pcw.4:413 uc001pcx.4:413 AF261943:413 AJ704725:413 AJ704726:413 AJ704727:413 AJ704728:413 AJ704729:413 AY288918:413



TATA-Box annotation


Distance to TSS:-100
Nearest PromoterID:NM_016931
Entrez ID:50507
Nearest Unigene:Hs.371036
Nearest Refseq:NM_016931
Nearest Ensembl:ENSG00000086991
Gene Name:NADPH oxidase 4
Gene Alias:KOX
Gene Description:NADPH oxidase 4
Gene Type:protein-coding
CpG%:0.03
GC%:0.577114
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):