Difference between revisions of "TSS:Mm 100062.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=BC141529:-133 |chr=chr11 |cpg_percent=0.085 |distance=-133 |distance_to_tss=-1641 |end=115323573 |entrez_id=16470 |gc_percent=0.641791 |gene_alias=Sans|...") |
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| Line 6: | Line 6: | ||
|distance_to_tss=-1641 | |distance_to_tss=-1641 | ||
|end=115323573 | |end=115323573 | ||
| + | |end_of_center_position=115323560 | ||
|entrez_id=16470 | |entrez_id=16470 | ||
|gc_percent=0.641791 | |gc_percent=0.641791 | ||
| − | |gene_alias=Sans | + | |gene_alias=Sans |
|gene_description=Usher syndrome 1G | |gene_description=Usher syndrome 1G | ||
|gene_id=237987 | |gene_id=237987 | ||
| Line 17: | Line 18: | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=MGI:2388365 | |hgnc_mgi_id=MGI:2388365 | ||
| + | |js= | ||
|nearest_ensembl=ENSMUSG00000045288 | |nearest_ensembl=ENSMUSG00000045288 | ||
|nearest_promoter_id=NM_176847 | |nearest_promoter_id=NM_176847 | ||
| Line 24: | Line 26: | ||
|species=mouse | |species=mouse | ||
|start=115323545 | |start=115323545 | ||
| + | |start_of_center_position=115323559 | ||
|strand=+ | |strand=+ | ||
|transcript_name=BC141529 | |transcript_name=BC141529 | ||
Revision as of 11:57, 12 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 115323559 |
|---|---|
| End of the center position in the TSS region: | 115323560 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | BC141529 |
|---|---|
| Distance: | -133 |
| Num_trans: | 1 |
| All_trans: | BC141529:-133 |
TATA-Box annotation
| Distance to TSS: | -1641 |
|---|---|
| Nearest PromoterID: | NM_176847 |
| Entrez ID: | 16470 |
| Nearest Unigene: | Mm.451539 |
| Nearest Refseq: | NM_176847 |
| Nearest Ensembl: | ENSMUSG00000045288 |
| Gene Name: | otopetrin 2 |
| Gene Alias: | Sans |
| Gene Description: | Usher syndrome 1G |
| Gene Type: | protein-coding |
| CpG%: | 0.085 |
| GC%: | 0.641791 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
