Difference between revisions of "TSS:Mm 100455.1"
From referenceTSS
(Created page with "{{TSSDetail |chr=chr11 |cpg_percent=0.015 |distance= |distance_to_tss=104828 |end=119729548 |entrez_id=319454 |gc_percent=0.457711 |gene_alias=A430071A18Rik |gene_description=...") |
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| Line 5: | Line 5: | ||
|distance_to_tss=104828 | |distance_to_tss=104828 | ||
|end=119729548 | |end=119729548 | ||
| + | |end_of_center_position=119729538 | ||
|entrez_id=319454 | |entrez_id=319454 | ||
|gc_percent=0.457711 | |gc_percent=0.457711 | ||
| Line 18: | Line 19: | ||
|species=mouse | |species=mouse | ||
|start=119729526 | |start=119729526 | ||
| + | |start_of_center_position=119729537 | ||
|strand=+ | |strand=+ | ||
|tata_box="12(GGCCTTTAAGAG,-,0.00),13(GCCTTTAAGAGA,-,0.00),14(CCTTTAAGAGAA,+,0.00)" | |tata_box="12(GGCCTTTAAGAG,-,0.00),13(GCCTTTAAGAGA,-,0.00),14(CCTTTAAGAGAA,+,0.00)" | ||
Revision as of 13:06, 12 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 119729537 |
|---|---|
| End of the center position in the TSS region: | 119729538 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | 104828 |
|---|---|
| Nearest PromoterID: | NR_045313 |
| Entrez ID: | 319454 |
| Nearest Unigene: | Mm.442144 |
| Nearest Refseq: | NR_045312 |
| Nearest Ensembl: | ENSMUSG00000085081 |
| Gene Name: | Rptoros |
| Gene Alias: | A430071A18Rik |
| Gene Description: | "regulatory associated protein of MTOR, complex 1, opposite strand" |
| Gene Type: | ncRNA |
| CpG%: | 0.015 |
| GC%: | 0.457711 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "12(GGCCTTTAAGAG,-,0.00),13(GCCTTTAAGAGA,-,0.00),14(CCTTTAAGAGAA,+,0.00)" |
