Difference between revisions of "TSS:Mm 100605.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=AK139325:-114 ENSMUST00000106113.1:-123 NM_001080932:-126 EU882160:-126 AK150439:212 uc011yjl.1:-430 uc007mvs.1:-430 |chr=chr11 |cpg_percent=0.215 |dist...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |5730434B08Rik= | ||
| + | |6230415M23Rik= | ||
| + | |ILF= | ||
| + | |Ilf1= | ||
|all_trans=AK139325:-114 ENSMUST00000106113.1:-123 NM_001080932:-126 EU882160:-126 AK150439:212 uc011yjl.1:-430 uc007mvs.1:-430 | |all_trans=AK139325:-114 ENSMUST00000106113.1:-123 NM_001080932:-126 EU882160:-126 AK150439:212 uc011yjl.1:-430 uc007mvs.1:-430 | ||
|chr=chr11 | |chr=chr11 | ||
| Line 6: | Line 10: | ||
|distance_to_tss=130 | |distance_to_tss=130 | ||
|end=121260121 | |end=121260121 | ||
| + | |end_of_center_position=121260117 | ||
|entrez_id=68837 | |entrez_id=68837 | ||
|gc_percent=0.865672 | |gc_percent=0.865672 | ||
| − | |gene_alias=1110054H05Rik | + | |gene_alias=1110054H05Rik |
|gene_description=forkhead box K2 | |gene_description=forkhead box K2 | ||
|gene_id=68837 | |gene_id=68837 | ||
| Line 24: | Line 29: | ||
|species=mouse | |species=mouse | ||
|start=121260112 | |start=121260112 | ||
| + | |start_of_center_position=121260116 | ||
|strand=+ | |strand=+ | ||
|transcript_name=AK139325 | |transcript_name=AK139325 | ||
Revision as of 13:35, 12 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 121260116 |
|---|---|
| End of the center position in the TSS region: | 121260117 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | AK139325 |
|---|---|
| Distance: | -114 |
| Num_trans: | 7 |
| All_trans: | AK139325:-114 ENSMUST00000106113.1:-123 NM_001080932:-126 EU882160:-126 AK150439:212 uc011yjl.1:-430 uc007mvs.1:-430 |
TATA-Box annotation
| Distance to TSS: | 130 |
|---|---|
| Nearest PromoterID: | NM_001080932 |
| Entrez ID: | 68837 |
| Nearest Unigene: | Mm.209750 |
| Nearest Refseq: | NM_001080932 |
| Nearest Ensembl: | ENSMUSG00000039275 |
| Gene Name: | forkhead box K2 |
| Gene Alias: | 1110054H05Rik |
| Gene Description: | forkhead box K2 |
| Gene Type: | protein-coding |
| CpG%: | 0.215 |
| GC%: | 0.865672 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
