Difference between revisions of "TSS:Hg 100315.1"
From referenceTSS
| Line 7: | Line 7: | ||
|distance_to_tss=400 | |distance_to_tss=400 | ||
|end=26892455 | |end=26892455 | ||
| + | |end_of_center_position=26892428 | ||
|entrez_id=79886 | |entrez_id=79886 | ||
|gc_percent=0.696517 | |gc_percent=0.696517 | ||
| − | |gene_alias=C9orf82 | + | |gene_alias=C9orf82 |
|gene_description=caspase activity and apoptosis inhibitor 1 | |gene_description=caspase activity and apoptosis inhibitor 1 | ||
|gene_id=79886 | |gene_id=79886 | ||
| Line 25: | Line 26: | ||
|species=human | |species=human | ||
|start=26892400 | |start=26892400 | ||
| + | |start_of_center_position=26892427 | ||
|strand=- | |strand=- | ||
|transcript_name=ENST00000625311.1 uc003zqb.4 AK300739 | |transcript_name=ENST00000625311.1 uc003zqb.4 AK300739 | ||
Revision as of 05:45, 11 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 26892427 |
|---|---|
| End of the center position in the TSS region: | 26892428 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000625311.1 uc003zqb.4 AK300739 |
|---|---|
| Distance: | 0 |
| Num_trans: | 20 |
| All_trans: | ENST00000625311.1:0 uc003zqb.4:0 AK300739:0 AK301673:29 ENST00000495958.5:-149 uc064slp.1:-149 HQ447530:-261 AB590748:-261 CU687198:-261 BC071953:-272 ENST00000483493.6:-332 uc064slo.1:-332 AK023719:-347 ENST00000520187.1:-348 uc064sln.1:-348 ENST00000333916.7:-349 uc003zqc.4:-349 BC014658:-349 NM_001167575:-373 NM_024828:-373 |
TATA-Box annotation
| Distance to TSS: | 400 |
|---|---|
| Nearest PromoterID: | NM_001167575 |
| Entrez ID: | 79886 |
| Nearest Unigene: | Hs.178357 |
| Nearest Refseq: | NM_024828 |
| Nearest Ensembl: | ENSG00000120159 |
| Gene Name: | caspase activity and apoptosis inhibitor 1 |
| Gene Alias: | C9orf82 |
| Gene Description: | caspase activity and apoptosis inhibitor 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.105 |
| GC%: | 0.696517 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
