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Difference between revisions of "TSS:Hg 100514.1"

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Line 6: Line 6:
 
|distance_to_tss=11
 
|distance_to_tss=11
 
|end=34458584
 
|end=34458584
 +
|end_of_center_position=34458559
 
|entrez_id=203259
 
|entrez_id=203259
 
|gc_percent=0.681592
 
|gc_percent=0.681592
Line 24: Line 25:
 
|species=human
 
|species=human
 
|start=34458533
 
|start=34458533
 +
|start_of_center_position=34458558
 
|strand=-
 
|strand=-
 
|transcript_name=ENST00000379089.5 ENST00000379087.5 ENST00000379084.5 ENST00000379081.5 ENST00000379080.5 ENST00000445726.5 ENST00000297620.8 ENST00000422409.5 ENST00000379078.1 NM_001184945 NM_001184943 NM_147202 NM_001184942 NM_001184941 NM_001184940 uc064srz.1 uc064ssa.1 uc064ssb.1 uc064ssc.1 uc064ssd.1 uc011lok.3 uc003zuj.4 uc064sse.1 uc064ssf.1 AK123887 BC041009 AK096350 AK294054 AK299882
 
|transcript_name=ENST00000379089.5 ENST00000379087.5 ENST00000379084.5 ENST00000379081.5 ENST00000379080.5 ENST00000445726.5 ENST00000297620.8 ENST00000422409.5 ENST00000379078.1 NM_001184945 NM_001184943 NM_147202 NM_001184942 NM_001184941 NM_001184940 uc064srz.1 uc064ssa.1 uc064ssb.1 uc064ssc.1 uc064ssd.1 uc011lok.3 uc003zuj.4 uc064sse.1 uc064ssf.1 AK123887 BC041009 AK096350 AK294054 AK299882

Revision as of 06:18, 11 May 2019

Basic information about the TSS

TSS ID:hg_100514.1
Species:human
Chr:chr9
TSS Classification:yes
Start:34458533
End:34458584
Strand:-
TSS Score:1
Start of the center position in the TSS region:34458558
End of the center position in the TSS region:34458559



Gene and protein annotation

Transcript_name:ENST00000379089.5 ENST00000379087.5 ENST00000379084.5 ENST00000379081.5 ENST00000379080.5 ENST00000445726.5 ENST00000297620.8 ENST00000422409.5 ENST00000379078.1 NM_001184945 NM_001184943 NM_147202 NM_001184942 NM_001184941 NM_001184940 uc064srz.1 uc064ssa.1 uc064ssb.1 uc064ssc.1 uc064ssd.1 uc011lok.3 uc003zuj.4 uc064sse.1 uc064ssf.1 AK123887 BC041009 AK096350 AK294054 AK299882
Distance:0
GeneID:203259
HGNC/MGI_ID:HGNC:19920
UniProt_ID:A0A0A0MRV9 A0A0A0MRW0 A0A0A0MRW1 A0A0A0MRW2 A0A0A0MRW3 Q5T586 Q5T593 Q8IW50
Gene_name:family with sequence similarity 219 member A
Gene_symbol:FAM219A
Gene_synonyms:FLJ39031 bA573M23.5
Gene_source:HGNC:19920



Transcript annotation

Transcript_name:ENST00000379089.5 ENST00000379087.5 ENST00000379084.5 ENST00000379081.5 ENST00000379080.5 ENST00000445726.5 ENST00000297620.8 ENST00000422409.5 ENST00000379078.1 NM_001184945 NM_001184943 NM_147202 NM_001184942 NM_001184941 NM_001184940 uc064srz.1 uc064ssa.1 uc064ssb.1 uc064ssc.1 uc064ssd.1 uc011lok.3 uc003zuj.4 uc064sse.1 uc064ssf.1 AK123887 BC041009 AK096350 AK294054 AK299882
Distance:0
Num_trans:30
All_trans:ENST00000379089.5:0 ENST00000379087.5:0 ENST00000379084.5:0 ENST00000379081.5:0 ENST00000379080.5:0 ENST00000445726.5:0 ENST00000297620.8:0 ENST00000422409.5:0 ENST00000379078.1:0 NM_001184945:0 NM_001184943:0 NM_147202:0 NM_001184942:0 NM_001184941:0 NM_001184940:0 uc064srz.1:0 uc064ssa.1:0 uc064ssb.1:0 uc064ssc.1:0 uc064ssd.1:0 uc011lok.3:0 uc003zuj.4:0 uc064sse.1:0 uc064ssf.1:0 AK123887:0 BC041009:0 AK096350:0 AK294054:0 AK299882:0 KJ895817:270



TATA-Box annotation

Distance to TSS:11
Nearest PromoterID:NM_147202
Entrez ID:203259
Nearest Unigene:Hs.493771
Nearest Refseq:NM_147202
Nearest Ensembl:ENSG00000164970
Gene Name:family with sequence similarity 219 member A
Gene Alias:C9orf25
Gene Description:family with sequence similarity 219 member A
Gene Type:protein-coding
CpG%:0.08
GC%:0.681592
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):
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