Difference between revisions of "TSS:Mm 1064.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENSMUST00000180570.1:0 ENSMUST00000189096.1:0 AK144579:0 |chr=chr1 |cpg_percent=0.105 |distance=0 |distance_to_tss=-36 |end=59119861 |entrez_id=381259 |...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |Als2cr4= | ||
| + | |Gm972= | ||
|all_trans=ENSMUST00000180570.1:0 ENSMUST00000189096.1:0 AK144579:0 | |all_trans=ENSMUST00000180570.1:0 ENSMUST00000189096.1:0 AK144579:0 | ||
|chr=chr1 | |chr=chr1 | ||
| Line 6: | Line 8: | ||
|distance_to_tss=-36 | |distance_to_tss=-36 | ||
|end=59119861 | |end=59119861 | ||
| + | |end_of_center_position=59119842 | ||
|entrez_id=381259 | |entrez_id=381259 | ||
|gc_percent=0.746269 | |gc_percent=0.746269 | ||
| − | |gene_alias=AI853305 | + | |gene_alias=AI853305 |
|gene_description=transmembrane protein 237 | |gene_description=transmembrane protein 237 | ||
|gene_id=100038354 | |gene_id=100038354 | ||
| Line 24: | Line 27: | ||
|species=mouse | |species=mouse | ||
|start=59119822 | |start=59119822 | ||
| + | |start_of_center_position=59119841 | ||
|strand=+ | |strand=+ | ||
|transcript_name=ENSMUST00000180570.1 ENSMUST00000189096.1 AK144579 | |transcript_name=ENSMUST00000180570.1 ENSMUST00000189096.1 AK144579 | ||
Revision as of 18:38, 10 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 59119841 |
|---|---|
| End of the center position in the TSS region: | 59119842 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENSMUST00000180570.1 ENSMUST00000189096.1 AK144579 |
|---|---|
| Distance: | 0 |
| Num_trans: | 3 |
| All_trans: | ENSMUST00000180570.1:0 ENSMUST00000189096.1:0 AK144579:0 |
TATA-Box annotation
| Distance to TSS: | -36 |
|---|---|
| Nearest PromoterID: | NM_001037812 |
| Entrez ID: | 381259 |
| Nearest Unigene: | Mm.261275 |
| Nearest Refseq: | NM_001033449 |
| Nearest Ensembl: | ENSMUSG00000038079 |
| Gene Name: | RIKEN cDNA G730003C15 gene |
| Gene Alias: | AI853305 |
| Gene Description: | transmembrane protein 237 |
| Gene Type: | protein-coding |
| CpG%: | 0.105 |
| GC%: | 0.746269 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
