Difference between revisions of "TSS:Mm 135307.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENSMUST00000124866.1:0 ENSMUST00000132697.1:0 AK149975:0 AK150109:0 AK018057:0 AK045213:0 AK155729:8 AK170685:10 BC138870:23 NM_020260:-132 uc007zfg.1:-...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |AU041750= | ||
| + | |Cdgap= | ||
| + | |D330026I07Rik= | ||
|all_trans=ENSMUST00000124866.1:0 ENSMUST00000132697.1:0 AK149975:0 AK150109:0 AK018057:0 AK045213:0 AK155729:8 AK170685:10 BC138870:23 NM_020260:-132 uc007zfg.1:-132 uc007zfh.1:-132 AF151363:187 AK164669:310 AK136348:-352 ENSMUST00000023487.4:-371 AK138417:-371 | |all_trans=ENSMUST00000124866.1:0 ENSMUST00000132697.1:0 AK149975:0 AK150109:0 AK018057:0 AK045213:0 AK155729:8 AK170685:10 BC138870:23 NM_020260:-132 uc007zfg.1:-132 uc007zfh.1:-132 AF151363:187 AK164669:310 AK136348:-352 ENSMUST00000023487.4:-371 AK138417:-371 | ||
|chr=chr16 | |chr=chr16 | ||
| Line 6: | Line 9: | ||
|distance_to_tss=152 | |distance_to_tss=152 | ||
|end=38712903 | |end=38712903 | ||
| + | |end_of_center_position=38712883 | ||
|entrez_id=12549 | |entrez_id=12549 | ||
|gc_percent=0.761194 | |gc_percent=0.761194 | ||
| − | |gene_alias=5830477L08Rik | + | |gene_alias=5830477L08Rik |
|gene_description=Rho GTPase activating protein 31 | |gene_description=Rho GTPase activating protein 31 | ||
|gene_id=12549 | |gene_id=12549 | ||
| Line 24: | Line 28: | ||
|species=mouse | |species=mouse | ||
|start=38712862 | |start=38712862 | ||
| + | |start_of_center_position=38712882 | ||
|strand=- | |strand=- | ||
|transcript_name=ENSMUST00000124866.1 ENSMUST00000132697.1 AK149975 AK150109 AK018057 AK045213 | |transcript_name=ENSMUST00000124866.1 ENSMUST00000132697.1 AK149975 AK150109 AK018057 AK045213 | ||
Revision as of 01:33, 14 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 38712882 |
|---|---|
| End of the center position in the TSS region: | 38712883 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENSMUST00000124866.1 ENSMUST00000132697.1 AK149975 AK150109 AK018057 AK045213 |
|---|---|
| Distance: | 0 |
| Num_trans: | 17 |
| All_trans: | ENSMUST00000124866.1:0 ENSMUST00000132697.1:0 AK149975:0 AK150109:0 AK018057:0 AK045213:0 AK155729:8 AK170685:10 BC138870:23 NM_020260:-132 uc007zfg.1:-132 uc007zfh.1:-132 AF151363:187 AK164669:310 AK136348:-352 ENSMUST00000023487.4:-371 AK138417:-371 |
TATA-Box annotation
| Distance to TSS: | 152 |
|---|---|
| Nearest PromoterID: | NM_020260 |
| Entrez ID: | 12549 |
| Nearest Unigene: | Mm.370848 |
| Nearest Refseq: | NM_020260 |
| Nearest Ensembl: | ENSMUSG00000022799 |
| Gene Name: | Rho GTPase activating protein 31 |
| Gene Alias: | 5830477L08Rik |
| Gene Description: | Rho GTPase activating protein 31 |
| Gene Type: | protein-coding |
| CpG%: | 0.135 |
| GC%: | 0.761194 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
