Difference between revisions of "TSS:Hg 102539.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.115 |distance_to_tss=29 |entrez_id=6136 |gc_percent=0.631841 |gene_alias=L12 |gene_description=ribosomal protein L12 |gene_name=RPL12 |gene_type=pro...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=ENST00000361436.9:0 ENST00000497825.5:0 ENST00000497322.1:0 uc004bqy.3:0 uc064vvj.1:0 uc064vvk.1:0 AK026526:0 AK057602:0 BC105603:0 AF037643:0 D28443:0 BC008230:2 BC050644:11 L06505:11 BC094831:16 NM_000976:-21 ENST00000536368.1:23 uc004bqz.3:23 BC059950:23 KJ901711:78 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.115 | |cpg_percent=0.115 | ||
| + | |distance=0 | ||
|distance_to_tss=29 | |distance_to_tss=29 | ||
| + | |end=127451411 | ||
|entrez_id=6136 | |entrez_id=6136 | ||
|gc_percent=0.631841 | |gc_percent=0.631841 | ||
|gene_alias=L12 | |gene_alias=L12 | ||
|gene_description=ribosomal protein L12 | |gene_description=ribosomal protein L12 | ||
| − | |gene_name=RPL12 | + | |gene_id=6136 |
| + | |gene_name=ribosomal protein L12 | ||
| + | |gene_source=HGNC:10302 | ||
| + | |gene_symbol=RPL12 | ||
| + | |gene_synonyms=L12 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:10302 | ||
|nearest_ensembl=ENSG00000197958 | |nearest_ensembl=ENSG00000197958 | ||
|nearest_promoter_id=NM_000976 | |nearest_promoter_id=NM_000976 | ||
|nearest_refseq=NM_000976 | |nearest_refseq=NM_000976 | ||
|nearest_unigene=Hs.408054 | |nearest_unigene=Hs.408054 | ||
| + | |num_trans=20 | ||
| + | |species=human | ||
| + | |start=127451395 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000361436.9 ENST00000497825.5 ENST00000497322.1 uc004bqy.3 uc064vvj.1 uc064vvk.1 AK026526 AK057602 BC105603 AF037643 D28443 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_102539.1 | |tss_id=hg_102539.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=P30050 | ||
}} | }} | ||
Revision as of 19:30, 8 March 2018
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000361436.9 ENST00000497825.5 ENST00000497322.1 uc004bqy.3 uc064vvj.1 uc064vvk.1 AK026526 AK057602 BC105603 AF037643 D28443 |
|---|---|
| Distance: | 0 |
| Num_trans: | 20 |
| All_trans: | ENST00000361436.9:0 ENST00000497825.5:0 ENST00000497322.1:0 uc004bqy.3:0 uc064vvj.1:0 uc064vvk.1:0 AK026526:0 AK057602:0 BC105603:0 AF037643:0 D28443:0 BC008230:2 BC050644:11 L06505:11 BC094831:16 NM_000976:-21 ENST00000536368.1:23 uc004bqz.3:23 BC059950:23 KJ901711:78 |
TATA-Box annotation
| Distance to TSS: | 29 |
|---|---|
| Nearest PromoterID: | NM_000976 |
| Entrez ID: | 6136 |
| Nearest Unigene: | Hs.408054 |
| Nearest Refseq: | NM_000976 |
| Nearest Ensembl: | ENSG00000197958 |
| Gene Name: | ribosomal protein L12 |
| Gene Alias: | L12 |
| Gene Description: | ribosomal protein L12 |
| Gene Type: | protein-coding |
| CpG%: | 0.115 |
| GC%: | 0.631841 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
