Difference between revisions of "TSS:Hg 105518.1"
From referenceTSS
| Line 6: | Line 6: | ||
|distance_to_tss=215 | |distance_to_tss=215 | ||
|end=72893777 | |end=72893777 | ||
| + | |end_of_center_position=72893771 | ||
|entrez_id=170392 | |entrez_id=170392 | ||
|gc_percent=0.482587 | |gc_percent=0.482587 | ||
| Line 19: | Line 20: | ||
|species=human | |species=human | ||
|start=72893764 | |start=72893764 | ||
| + | |start_of_center_position=72893770 | ||
|strand=+ | |strand=+ | ||
|tata_box="-66(GGCCTTAAAAAA,-,0.00)" | |tata_box="-66(GGCCTTAAAAAA,-,0.00)" | ||
Revision as of 05:03, 12 May 2019
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 72893770 |
|---|---|
| End of the center position in the TSS region: | 72893771 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | KJ903964 HQ258178 |
|---|---|
| Distance: | 22 |
| Num_trans: | 12 |
| All_trans: | KJ903964:22 HQ258178:22 AY013707:-40 AY358339:-162 ENST00000622652.1:-181 uc057tze.1:-181 BC126440:-181 ENST00000334011.9:-184 uc001jte.2:-184 AK096435:-184 NM_152635:-209 NR_130125:-209 |
TATA-Box annotation
| Distance to TSS: | 215 |
|---|---|
| Nearest PromoterID: | NR_130125 |
| Entrez ID: | 170392 |
| Nearest Unigene: | Hs.8366 |
| Nearest Refseq: | NM_152635 |
| Nearest Ensembl: | ENSG00000138315 |
| Gene Name: | OIT3 |
| Gene Alias: | LZP |
| Gene Description: | oncoprotein induced transcript 3 |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.482587 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-66(GGCCTTAAAAAA,-,0.00)" |
