Difference between revisions of "TSS:Mm 160975.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=AK204666:-33 AK192836:-35 AK195947:-35 AK198173:-35 ENSMUST00000092663.3:-50 AF218250:-50 AF218251:-50 AB022321:-56 U13836:-68 AK215374:-116 AK214847:-1...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |ATP6a1= | ||
| + | |Atp6n1= | ||
| + | |Atp6n1a= | ||
| + | |Atpv0a1= | ||
| + | |Vpp-1= | ||
| + | |Vpp1= | ||
|all_trans=AK204666:-33 AK192836:-35 AK195947:-35 AK198173:-35 ENSMUST00000092663.3:-50 AF218250:-50 AF218251:-50 AB022321:-56 U13836:-68 AK215374:-116 AK214847:-116 AK045877:191 | |all_trans=AK204666:-33 AK192836:-35 AK195947:-35 AK198173:-35 ENSMUST00000092663.3:-50 AF218250:-50 AF218251:-50 AB022321:-56 U13836:-68 AK215374:-116 AK214847:-116 AK045877:191 | ||
|chr=chr11 | |chr=chr11 | ||
| Line 6: | Line 12: | ||
|distance_to_tss=2419 | |distance_to_tss=2419 | ||
|end=101011871 | |end=101011871 | ||
| + | |end_of_center_position=101011871 | ||
|entrez_id=11975 | |entrez_id=11975 | ||
|gc_percent=0.472637 | |gc_percent=0.472637 | ||
| − | |gene_alias=AA959968 | + | |gene_alias=AA959968 |
|gene_description="ATPase, H+ transporting, lysosomal V0 subunit A1" | |gene_description="ATPase, H+ transporting, lysosomal V0 subunit A1" | ||
|gene_id=11975 | |gene_id=11975 | ||
| Line 24: | Line 31: | ||
|species=mouse | |species=mouse | ||
|start=101011870 | |start=101011870 | ||
| + | |start_of_center_position=101011870 | ||
|strand=+ | |strand=+ | ||
|transcript_name=AK204666 | |transcript_name=AK204666 | ||
Revision as of 09:45, 12 May 2019
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 101011870 |
|---|---|
| End of the center position in the TSS region: | 101011871 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | AK204666 |
|---|---|
| Distance: | -33 |
| Num_trans: | 12 |
| All_trans: | AK204666:-33 AK192836:-35 AK195947:-35 AK198173:-35 ENSMUST00000092663.3:-50 AF218250:-50 AF218251:-50 AB022321:-56 U13836:-68 AK215374:-116 AK214847:-116 AK045877:191 |
TATA-Box annotation
| Distance to TSS: | 2419 |
|---|---|
| Nearest PromoterID: | NM_001243051 |
| Entrez ID: | 11975 |
| Nearest Unigene: | Mm.340818 |
| Nearest Refseq: | NM_016920 |
| Nearest Ensembl: | ENSMUSG00000019302 |
| Gene Name: | "ATPase, H+ transporting, lysosomal V0 subunit A1" |
| Gene Alias: | AA959968 |
| Gene Description: | "ATPase, H+ transporting, lysosomal V0 subunit A1" |
| Gene Type: | protein-coding |
| CpG%: | 0.025 |
| GC%: | 0.472637 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
