Difference between revisions of "TSS:Hg 109294.1"
From referenceTSS
| Line 8: | Line 8: | ||
|distance_to_tss=209 | |distance_to_tss=209 | ||
|end=48274710 | |end=48274710 | ||
| + | |end_of_center_position=48274690 | ||
|entrez_id=143162 | |entrez_id=143162 | ||
|gc_percent=0.567164 | |gc_percent=0.567164 | ||
| − | |gene_alias=PDZD5C | + | |gene_alias=PDZD5C |
|gene_description=FERM and PDZ domain containing 2 | |gene_description=FERM and PDZ domain containing 2 | ||
|gene_id=143162 | |gene_id=143162 | ||
| Line 26: | Line 27: | ||
|species=human | |species=human | ||
|start=48274668 | |start=48274668 | ||
| + | |start_of_center_position=48274689 | ||
|strand=- | |strand=- | ||
|transcript_name=ENST00000486151.5 uc057tcm.1 AK131386 AK303923 | |transcript_name=ENST00000486151.5 uc057tcm.1 AK131386 AK303923 | ||
Revision as of 03:05, 12 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 48274689 |
|---|---|
| End of the center position in the TSS region: | 48274690 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000486151.5 uc057tcm.1 AK131386 AK303923 |
|---|---|
| Distance: | 0 |
| Num_trans: | 10 |
| All_trans: | ENST00000486151.5:0 uc057tcm.1:0 AK131386:0 AK303923:0 BC156408:104 BC157131:104 ENST00000374201.7:-160 uc001jgi.5:-160 CR749241:-160 NM_001018071:-188 |
TATA-Box annotation
| Distance to TSS: | 209 |
|---|---|
| Nearest PromoterID: | NM_001018071 |
| Entrez ID: | 143162 |
| Nearest Unigene: | Hs.664786 |
| Nearest Refseq: | NM_152428 |
| Nearest Ensembl: | ENSG00000170324 |
| Gene Name: | FERM and PDZ domain containing 2 |
| Gene Alias: | PDZD5C |
| Gene Description: | FERM and PDZ domain containing 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.025 |
| GC%: | 0.567164 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
