Difference between revisions of "TSS:Mm 50242.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=AK184760:-49 AK190613:80 AK176971:-143 DQ693662:-247 AK204916:-268 |chr=chr6 |cpg_percent=0.015 |distance=-49 |distance_to_tss=1927 |end=42351759 |entre...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |R75157= | ||
|all_trans=AK184760:-49 AK190613:80 AK176971:-143 DQ693662:-247 AK204916:-268 | |all_trans=AK184760:-49 AK190613:80 AK176971:-143 DQ693662:-247 AK204916:-268 | ||
|chr=chr6 | |chr=chr6 | ||
| Line 6: | Line 7: | ||
|distance_to_tss=1927 | |distance_to_tss=1927 | ||
|end=42351759 | |end=42351759 | ||
| + | |end_of_center_position=42351755 | ||
|entrez_id=22793 | |entrez_id=22793 | ||
|gc_percent=0.557214 | |gc_percent=0.557214 | ||
| − | |gene_alias=9530098H06Rik | + | |gene_alias=9530098H06Rik |
|gene_description=zyxin | |gene_description=zyxin | ||
|gene_id=22793 | |gene_id=22793 | ||
| Line 24: | Line 26: | ||
|species=mouse | |species=mouse | ||
|start=42351750 | |start=42351750 | ||
| + | |start_of_center_position=42351754 | ||
|strand=+ | |strand=+ | ||
|transcript_name=AK184760 | |transcript_name=AK184760 | ||
Revision as of 10:03, 12 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 42351754 |
|---|---|
| End of the center position in the TSS region: | 42351755 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | AK184760 |
|---|---|
| Distance: | -49 |
| Num_trans: | 5 |
| All_trans: | AK184760:-49 AK190613:80 AK176971:-143 DQ693662:-247 AK204916:-268 |
TATA-Box annotation
| Distance to TSS: | 1927 |
|---|---|
| Nearest PromoterID: | NM_001289619 |
| Entrez ID: | 22793 |
| Nearest Unigene: | Mm.282303 |
| Nearest Refseq: | NM_011777 |
| Nearest Ensembl: | ENSMUSG00000029860 |
| Gene Name: | zyxin |
| Gene Alias: | 9530098H06Rik |
| Gene Description: | zyxin |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.557214 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
