Difference between revisions of "TSS:Hg 114450.1"
From referenceTSS
| Line 11: | Line 11: | ||
|distance_to_tss=-3 | |distance_to_tss=-3 | ||
|end=60280544 | |end=60280544 | ||
| + | |end_of_center_position=60280538 | ||
|entrez_id=51338 | |entrez_id=51338 | ||
|gc_percent=0.412935 | |gc_percent=0.412935 | ||
| − | |gene_alias=4SPAN1 | + | |gene_alias=4SPAN1 |
|gene_description=membrane spanning 4-domains A4A | |gene_description=membrane spanning 4-domains A4A | ||
|gene_id=51338 | |gene_id=51338 | ||
| Line 29: | Line 30: | ||
|species=human | |species=human | ||
|start=60280531 | |start=60280531 | ||
| + | |start_of_center_position=60280537 | ||
|strand=+ | |strand=+ | ||
|tata_box="-32(CGATATAAAAGA,-,0.00)" | |tata_box="-32(CGATATAAAAGA,-,0.00)" | ||
Revision as of 16:58, 12 May 2019
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 60280537 |
|---|---|
| End of the center position in the TSS region: | 60280538 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000532114.5 NM_148975 NM_001243266 NM_024021 uc001npc.4 |
|---|---|
| Distance: | 0 |
| Num_trans: | 23 |
| All_trans: | ENST00000532114.5:0 NM_148975:0 NM_001243266:0 NM_024021:0 uc001npc.4:0 ENST00000337908.4:42 uc001noz.4:42 AK292089:42 ENST00000343968.8:112 uc058bto.1:112 AK075081:112 BC020648:122 ENST00000527056.5:125 uc058btp.1:125 CU676600:130 KJ893892:130 DQ891395:131 DQ894573:131 AB022821:132 ENST00000529950.1:141 uc058btq.1:141 AK314033:154 AB013102:157 |
TATA-Box annotation
| Distance to TSS: | -3 |
|---|---|
| Nearest PromoterID: | NM_148975 |
| Entrez ID: | 51338 |
| Nearest Unigene: | Hs.325960 |
| Nearest Refseq: | NM_024021 |
| Nearest Ensembl: | ENSG00000110079 |
| Gene Name: | membrane spanning 4-domains A4A |
| Gene Alias: | 4SPAN1 |
| Gene Description: | membrane spanning 4-domains A4A |
| Gene Type: | protein-coding |
| CpG%: | 0.01 |
| GC%: | 0.412935 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-32(CGATATAAAAGA,-,0.00)" |
