Difference between revisions of "TSS:Hg 114452.1"
From referenceTSS
| Line 11: | Line 11: | ||
|distance_to_tss=44 | |distance_to_tss=44 | ||
|end=60280590 | |end=60280590 | ||
| + | |end_of_center_position=60280586 | ||
|entrez_id=51338 | |entrez_id=51338 | ||
|gc_percent=0.447761 | |gc_percent=0.447761 | ||
| − | |gene_alias=4SPAN1 | + | |gene_alias=4SPAN1 |
|gene_description=membrane spanning 4-domains A4A | |gene_description=membrane spanning 4-domains A4A | ||
|gene_id=51338 | |gene_id=51338 | ||
| Line 29: | Line 30: | ||
|species=human | |species=human | ||
|start=60280580 | |start=60280580 | ||
| + | |start_of_center_position=60280585 | ||
|strand=+ | |strand=+ | ||
|tata_box="-79(CGATATAAAAGA,-,0.00)" | |tata_box="-79(CGATATAAAAGA,-,0.00)" | ||
Revision as of 16:59, 12 May 2019
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 60280585 |
|---|---|
| End of the center position in the TSS region: | 60280586 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000337908.4 uc001noz.4 AK292089 |
|---|---|
| Distance: | 0 |
| Num_trans: | 23 |
| All_trans: | ENST00000337908.4:0 uc001noz.4:0 AK292089:0 ENST00000532114.5:-40 NM_148975:-40 NM_001243266:-40 NM_024021:-40 uc001npc.4:-40 ENST00000343968.8:66 uc058bto.1:66 AK075081:66 BC020648:76 ENST00000527056.5:79 uc058btp.1:79 CU676600:84 KJ893892:84 DQ891395:85 DQ894573:85 AB022821:86 ENST00000529950.1:95 uc058btq.1:95 AK314033:108 AB013102:111 |
TATA-Box annotation
| Distance to TSS: | 44 |
|---|---|
| Nearest PromoterID: | NM_001243266 |
| Entrez ID: | 51338 |
| Nearest Unigene: | Hs.325960 |
| Nearest Refseq: | NM_024021 |
| Nearest Ensembl: | ENSG00000110079 |
| Gene Name: | membrane spanning 4-domains A4A |
| Gene Alias: | 4SPAN1 |
| Gene Description: | membrane spanning 4-domains A4A |
| Gene Type: | protein-coding |
| CpG%: | 0.01 |
| GC%: | 0.447761 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-79(CGATATAAAAGA,-,0.00)" |
