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Difference between revisions of "TSS:Hg 117854.1"

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Line 8: Line 8:
 
|distance_to_tss=163
 
|distance_to_tss=163
 
|end=914901
 
|end=914901
 +
|end_of_center_position=914896
 
|entrez_id=66005
 
|entrez_id=66005
 
|gc_percent=0.626866
 
|gc_percent=0.626866
|gene_alias=GL008|SI-CLP|SICLP
+
|gene_alias=GL008
 
|gene_description=chitinase domain containing 1
 
|gene_description=chitinase domain containing 1
 
|gene_id=66005
 
|gene_id=66005
Line 26: Line 27:
 
|species=human
 
|species=human
 
|start=914889
 
|start=914889
 +
|start_of_center_position=914895
 
|strand=-
 
|strand=-
 
|transcript_name=ENST00000533059.5 uc057xqi.1
 
|transcript_name=ENST00000533059.5 uc057xqi.1

Revision as of 11:22, 12 May 2019

Basic information about the TSS


TSS ID:hg_117854.1
Species:human
Chr:chr11
TSS Classification:yes
Start:914889
End:914901
Strand:-
TSS Score:1
Start of the center position in the TSS region:914895
End of the center position in the TSS region:914896



Gene and protein annotation


Transcript_name:ENST00000533059.5 uc057xqi.1
Distance:70
GeneID:66005
HGNC/MGI_ID:HGNC:28474
UniProt_ID:E9PIP0
Gene_name:chitinase domain containing 1
Gene_symbol:CHID1
Gene_synonyms:FLJ42707 MGC3234
Gene_source:HGNC:28474



Transcript annotation


Transcript_name:ENST00000533059.5 uc057xqi.1
Distance:70
Num_trans:12
All_trans:ENST00000533059.5:70 uc057xqi.1:70 ENST00000525840.1:89 uc057xql.1:89 ENST00000528154.1:116 uc057xqm.1:116 ENST00000449825.5:-157 ENST00000533056.5:-157 NM_001142675:-157 uc010qww.3:-157 uc057xqh.1:-157 AK301245:208



TATA-Box annotation


Distance to TSS:163
Nearest PromoterID:NM_001142675
Entrez ID:66005
Nearest Unigene:Hs.144468
Nearest Refseq:NM_023947
Nearest Ensembl:ENSG00000177830
Gene Name:chitinase domain containing 1
Gene Alias:GL008
Gene Description:chitinase domain containing 1
Gene Type:protein-coding
CpG%:0.03
GC%:0.626866
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):