Difference between revisions of "TSS:Hg 11862.1"
From referenceTSS
| Line 8: | Line 8: | ||
|distance_to_tss=235 | |distance_to_tss=235 | ||
|end=39576642 | |end=39576642 | ||
| + | |end_of_center_position=39576615 | ||
|entrez_id=8761 | |entrez_id=8761 | ||
|gc_percent=0.626866 | |gc_percent=0.626866 | ||
| − | |gene_alias=APP-1 | + | |gene_alias=APP-1 |
|gene_description=poly(A) binding protein cytoplasmic 4 | |gene_description=poly(A) binding protein cytoplasmic 4 | ||
|gene_id=8761 | |gene_id=8761 | ||
| Line 27: | Line 28: | ||
|species=human | |species=human | ||
|start=39576586 | |start=39576586 | ||
| + | |start_of_center_position=39576614 | ||
|strand=- | |strand=- | ||
|transcript_name=ENST00000372857.7 uc010oiv.2 U75686 | |transcript_name=ENST00000372857.7 uc010oiv.2 U75686 | ||
Revision as of 22:57, 10 May 2019
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 39576614 |
|---|---|
| End of the center position in the TSS region: | 39576615 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000372857.7 uc010oiv.2 U75686 |
|---|---|
| Distance: | -102 |
| Num_trans: | 20 |
| All_trans: | ENST00000372857.7:-102 uc010oiv.2:-102 U75686:-102 ENST00000372856.7:-109 uc001cdm.3:-109 BC065540:-109 BC071591:-143 ENST00000531243.2:-145 uc057fcd.1:-145 ENST00000451091.2:-148 uc057fcc.1:-148 BC094755:-148 ENST00000372858.7:186 uc001cdl.3:186 BC029969:186 NM_001135654:-207 NM_001135653:-207 NM_003819:-207 ENST00000372862.7:334 uc057fbl.1:334 |
TATA-Box annotation
| Distance to TSS: | 235 |
|---|---|
| Nearest PromoterID: | NM_001135654 |
| Entrez ID: | 8761 |
| Nearest Unigene: | Hs.169900 |
| Nearest Refseq: | NM_003819 |
| Nearest Ensembl: | ENSG00000090621 |
| Gene Name: | "poly(A) binding protein, cytoplasmic 4 (inducible form)" |
| Gene Alias: | APP-1 |
| Gene Description: | poly(A) binding protein cytoplasmic 4 |
| Gene Type: | protein-coding |
| CpG%: | 0.135 |
| GC%: | 0.626866 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
