Difference between revisions of "TSS:Hg 100204.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.1 |distance_to_tss=41 |entrez_id=401494 |gc_percent=0.711443 |gene_alias=PTPLAD2 |gene_description=3-hydroxyacyl-CoA dehydratase 4 |gene_name=HACD4...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=ENST00000495827.2:0 NM_001010915:0 uc010miq.3:0 BX648779:0 BC114215:8 KJ896252:25 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.1 | |cpg_percent=0.1 | ||
| + | |distance=0 | ||
|distance_to_tss=41 | |distance_to_tss=41 | ||
| + | |end=21031652 | ||
|entrez_id=401494 | |entrez_id=401494 | ||
|gc_percent=0.711443 | |gc_percent=0.711443 | ||
|gene_alias=PTPLAD2 | |gene_alias=PTPLAD2 | ||
|gene_description=3-hydroxyacyl-CoA dehydratase 4 | |gene_description=3-hydroxyacyl-CoA dehydratase 4 | ||
| − | |gene_name=HACD4 | + | |gene_id=401494 |
| + | |gene_name=3-hydroxyacyl-CoA dehydratase 4 | ||
| + | |gene_source=HGNC:20920 | ||
| + | |gene_symbol=HACD4 | ||
| + | |gene_synonyms=Em:AL662879.1 OTTHUMG00000021016 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:20920 | ||
|nearest_ensembl=ENSG00000188921 | |nearest_ensembl=ENSG00000188921 | ||
|nearest_promoter_id=NM_001321903 | |nearest_promoter_id=NM_001321903 | ||
|nearest_refseq=NM_001010915 | |nearest_refseq=NM_001010915 | ||
|nearest_unigene=Hs.716678 | |nearest_unigene=Hs.716678 | ||
| + | |num_trans=6 | ||
| + | |species=human | ||
| + | |start=21031616 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000495827.2 NM_001010915 uc010miq.3 BX648779 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_100204.1 | |tss_id=hg_100204.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=Q5VWC8 | ||
}} | }} | ||
Revision as of 17:03, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000495827.2 NM_001010915 uc010miq.3 BX648779 |
|---|---|
| Distance: | 0 |
| Num_trans: | 6 |
| All_trans: | ENST00000495827.2:0 NM_001010915:0 uc010miq.3:0 BX648779:0 BC114215:8 KJ896252:25 |
TATA-Box annotation
| Distance to TSS: | 41 |
|---|---|
| Nearest PromoterID: | NM_001321903 |
| Entrez ID: | 401494 |
| Nearest Unigene: | Hs.716678 |
| Nearest Refseq: | NM_001010915 |
| Nearest Ensembl: | ENSG00000188921 |
| Gene Name: | 3-hydroxyacyl-CoA dehydratase 4 |
| Gene Alias: | PTPLAD2 |
| Gene Description: | 3-hydroxyacyl-CoA dehydratase 4 |
| Gene Type: | protein-coding |
| CpG%: | 0.1 |
| GC%: | 0.711443 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
