Difference between revisions of "TSS:Hg 10480.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.13 |distance_to_tss=-460 |entrez_id=729614 |gc_percent=0.696517 |gene_alias=- |gene_description=uncharacterized LOC729614 |gene_name=FLJ37453 |gene_...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=ENST00000317122.2:453 NR_024279:453 uc001axj.3:453 AK124018:453 | ||
| + | |chr=chr1 | ||
|cpg_percent=0.13 | |cpg_percent=0.13 | ||
| + | |distance=453 | ||
|distance_to_tss=-460 | |distance_to_tss=-460 | ||
| + | |end=15848614 | ||
|entrez_id=729614 | |entrez_id=729614 | ||
|gc_percent=0.696517 | |gc_percent=0.696517 | ||
|gene_alias=- | |gene_alias=- | ||
|gene_description=uncharacterized LOC729614 | |gene_description=uncharacterized LOC729614 | ||
| − | |gene_name=FLJ37453 | + | |gene_id=729614 |
| + | |gene_name=uncharacterized LOC729614 | ||
| + | |gene_source=EntrezGene:729614 | ||
| + | |gene_symbol=FLJ37453 | ||
| + | |gene_synonyms= | ||
|gene_type=ncRNA | |gene_type=ncRNA | ||
| + | |hgnc_mgi_id= | ||
|nearest_ensembl=ENSG00000179743 | |nearest_ensembl=ENSG00000179743 | ||
|nearest_promoter_id=NR_024279 | |nearest_promoter_id=NR_024279 | ||
|nearest_refseq=NR_024279 | |nearest_refseq=NR_024279 | ||
|nearest_unigene=Hs.119298 | |nearest_unigene=Hs.119298 | ||
| + | |num_trans=4 | ||
| + | |species=human | ||
| + | |start=15848599 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000317122.2 NR_024279 uc001axj.3 AK124018 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_10480.1 | |tss_id=hg_10480.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 21:08, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000317122.2 NR_024279 uc001axj.3 AK124018 |
|---|---|
| Distance: | 453 |
| Num_trans: | 4 |
| All_trans: | ENST00000317122.2:453 NR_024279:453 uc001axj.3:453 AK124018:453 |
TATA-Box annotation
| Distance to TSS: | -460 |
|---|---|
| Nearest PromoterID: | NR_024279 |
| Entrez ID: | 729614 |
| Nearest Unigene: | Hs.119298 |
| Nearest Refseq: | NR_024279 |
| Nearest Ensembl: | ENSG00000179743 |
| Gene Name: | uncharacterized LOC729614 |
| Gene Alias: | - |
| Gene Description: | uncharacterized LOC729614 |
| Gene Type: | ncRNA |
| CpG%: | 0.13 |
| GC%: | 0.696517 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
