Difference between revisions of "TSS:Hg 104928.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.065 |distance_to_tss=70 |entrez_id=5592 |gc_percent=0.626866 |gene_alias=AAT8|PKG|PRKG1B|PRKGR1B|cGK|cGK 1|cGK1|cGKI|cGKI-BETA|cGKI-alpha |gene_desc...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |PKG= | ||
| + | |PRKG1B= | ||
| + | |PRKGR1B= | ||
| + | |all_trans=BC127090:-8 Y07512:-8 BC062688:22 EF560730:-31 AK313416:-43 AB590766:43 GQ129235:43 GQ129236:43 KJ891891:43 NM_006258:-67 ENST00000373980.8:-367 uc001jjo.4:-367 | ||
| + | |cGK= | ||
| + | |cGK 1= | ||
| + | |cGK1= | ||
| + | |cGKI= | ||
| + | |cGKI-BETA= | ||
| + | |cGKI-alpha= | ||
| + | |chr=chr10 | ||
|cpg_percent=0.065 | |cpg_percent=0.065 | ||
| + | |distance=-8 | ||
|distance_to_tss=70 | |distance_to_tss=70 | ||
| + | |end=51074547 | ||
|entrez_id=5592 | |entrez_id=5592 | ||
|gc_percent=0.626866 | |gc_percent=0.626866 | ||
|gene_alias=AAT8|PKG|PRKG1B|PRKGR1B|cGK|cGK 1|cGK1|cGKI|cGKI-BETA|cGKI-alpha | |gene_alias=AAT8|PKG|PRKG1B|PRKGR1B|cGK|cGK 1|cGK1|cGKI|cGKI-BETA|cGKI-alpha | ||
|gene_description="protein kinase, cGMP-dependent, type I" | |gene_description="protein kinase, cGMP-dependent, type I" | ||
| − | |gene_name=PRKG1 | + | |gene_id=5592 |
| + | |gene_name="protein kinase, cGMP-dependent, type I" | ||
| + | |gene_source=HGNC:9414 | ||
| + | |gene_symbol=PRKG1 | ||
| + | |gene_synonyms=PGK PKG | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:9414 | ||
|nearest_ensembl=ENSG00000185532 | |nearest_ensembl=ENSG00000185532 | ||
|nearest_promoter_id=NM_006258 | |nearest_promoter_id=NM_006258 | ||
|nearest_refseq=NM_006258 | |nearest_refseq=NM_006258 | ||
|nearest_unigene=Hs.407535 | |nearest_unigene=Hs.407535 | ||
| + | |num_trans=12 | ||
| + | |species=human | ||
| + | |start=51074540 | ||
| + | |strand=+ | ||
| + | |transcript_name=BC127090 Y07512 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_104928.1 | |tss_id=hg_104928.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 21:13, 8 March 2018
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | BC127090 Y07512 |
|---|---|
| Distance: | -8 |
| Num_trans: | 12 |
| All_trans: | BC127090:-8 Y07512:-8 BC062688:22 EF560730:-31 AK313416:-43 AB590766:43 GQ129235:43 GQ129236:43 KJ891891:43 NM_006258:-67 ENST00000373980.8:-367 uc001jjo.4:-367 |
TATA-Box annotation
| Distance to TSS: | 70 |
|---|---|
| Nearest PromoterID: | NM_006258 |
| Entrez ID: | 5592 |
| Nearest Unigene: | Hs.407535 |
| Nearest Refseq: | NM_006258 |
| Nearest Ensembl: | ENSG00000185532 |
| Gene Name: | "protein kinase, cGMP-dependent, type I" |
| Gene Alias: | AAT8 |
| Gene Description: | "protein kinase, cGMP-dependent, type I" |
| Gene Type: | protein-coding |
| CpG%: | 0.065 |
| GC%: | 0.626866 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
