Difference between revisions of "TSS:Hg 129646.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENST00000535904.5:-44 uc058lgv.1:-44 K03207:-44 ENST00000279575.5:-47 ENST00000621732.4:-47 ENST00000445719.2:-47 NM_002723:-47 NM_001261399:-47 uc001qz...") |
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|distance_to_tss=50 | |distance_to_tss=50 | ||
|end=11310388 | |end=11310388 | ||
| + | |end_of_center_position=11310385 | ||
|entrez_id=5545 | |entrez_id=5545 | ||
|gc_percent=0.537313 | |gc_percent=0.537313 | ||
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|species=human | |species=human | ||
|start=11310381 | |start=11310381 | ||
| + | |start_of_center_position=11310384 | ||
|strand=- | |strand=- | ||
|tata_box="-83(CTCTTTATAAAG,-,0.00),-81(CTTTATAAAGGG,+,0.00),-81(CTTTATAAAGGG,-,0.00)" | |tata_box="-83(CTCTTTATAAAG,-,0.00),-81(CTTTATAAAGGG,+,0.00),-81(CTTTATAAAGGG,-,0.00)" | ||
Revision as of 04:04, 13 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 11310384 |
|---|---|
| End of the center position in the TSS region: | 11310385 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000535904.5 uc058lgv.1 K03207 |
|---|---|
| Distance: | -44 |
| Num_trans: | 12 |
| All_trans: | ENST00000535904.5:-44 uc058lgv.1:-44 K03207:-44 ENST00000279575.5:-47 ENST00000621732.4:-47 ENST00000445719.2:-47 NM_002723:-47 NM_001261399:-47 uc001qzt.5:-47 uc031qgh.2:-47 uc058lgw.1:-47 BC128191:-47 |
TATA-Box annotation
| Distance to TSS: | 50 |
|---|---|
| Nearest PromoterID: | NM_001261399 |
| Entrez ID: | 5545 |
| Nearest Unigene: | Hs.528651 |
| Nearest Refseq: | NM_002723 |
| Nearest Ensembl: | ENSG00000230657 |
| Gene Name: | proline-rich protein BstNI subfamily 4 |
| Gene Alias: | Po |
| Gene Description: | proline rich protein BstNI subfamily 4 |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.537313 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-83(CTCTTTATAAAG,-,0.00),-81(CTTTATAAAGGG,+,0.00),-81(CTTTATAAAGGG,-,0.00)" |
