Difference between revisions of "TSS:Hg 130418.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=BC094762:0 BC126199:0 BC143966:0 BC143967:0 ENST00000070846.10:2 uc001rlj.5:2 X97675:2 ENST00000340811.8:-18 uc001rlk.5:-18 BC070083:-18 HQ258660:21 KJ8...") |
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|distance_to_tss=56 | |distance_to_tss=56 | ||
|end=32896822 | |end=32896822 | ||
| + | |end_of_center_position=32896790 | ||
|entrez_id=5318 | |entrez_id=5318 | ||
|gc_percent=0.81592 | |gc_percent=0.81592 | ||
| Line 24: | Line 25: | ||
|species=human | |species=human | ||
|start=32896757 | |start=32896757 | ||
| + | |start_of_center_position=32896789 | ||
|strand=- | |strand=- | ||
|transcript_name=BC094762 BC126199 BC143966 BC143967 | |transcript_name=BC094762 BC126199 BC143966 BC143967 | ||
Revision as of 06:10, 13 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 32896789 |
|---|---|
| End of the center position in the TSS region: | 32896790 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | BC094762 BC126199 BC143966 BC143967 |
|---|---|
| Distance: | 0 |
| Num_trans: | 28 |
| All_trans: | BC094762:0 BC126199:0 BC143966:0 BC143967:0 ENST00000070846.10:2 uc001rlj.5:2 X97675:2 ENST00000340811.8:-18 uc001rlk.5:-18 BC070083:-18 HQ258660:21 KJ891818:21 KR711660:21 KR711661:21 KR711662:21 KR711663:21 KR712218:21 NM_004572:-24 NM_001005242:-24 AB590796:25 ENST00000613243.1:27 uc058mpw.1:27 EU520483:27 EU520484:27 EU520485:27 EU520486:27 ENST00000546741.2:157 uc058mqb.1:157 |
TATA-Box annotation
| Distance to TSS: | 56 |
|---|---|
| Nearest PromoterID: | NM_004572 |
| Entrez ID: | 5318 |
| Nearest Unigene: | Hs.164384 |
| Nearest Refseq: | NM_004572 |
| Nearest Ensembl: | ENSG00000057294 |
| Gene Name: | plakophilin 2 |
| Gene Alias: | ARVD9 |
| Gene Description: | plakophilin 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.135 |
| GC%: | 0.81592 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
