Difference between revisions of "TSS:Hg 134512.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENST00000473558.5:-78 uc058waf.1:-78 NM_000982:104 ENST00000461690.5:110 uc058wag.1:110 L25348:118 ENST00000272274.8:128 uc058wah.1:128 ENST00000311549....") |
|||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |L21= | ||
|all_trans=ENST00000473558.5:-78 uc058waf.1:-78 NM_000982:104 ENST00000461690.5:110 uc058wag.1:110 L25348:118 ENST00000272274.8:128 uc058wah.1:128 ENST00000311549.10:-131 uc001ura.4:-131 ENST00000319826.8:132 uc058wai.1:132 ENST00000326092.8:146 uc058waj.1:146 | |all_trans=ENST00000473558.5:-78 uc058waf.1:-78 NM_000982:104 ENST00000461690.5:110 uc058wag.1:110 L25348:118 ENST00000272274.8:128 uc058wah.1:128 ENST00000311549.10:-131 uc001ura.4:-131 ENST00000319826.8:132 uc058wai.1:132 ENST00000326092.8:146 uc058waj.1:146 | ||
|chr=chr13 | |chr=chr13 | ||
| Line 6: | Line 7: | ||
|distance_to_tss=-110 | |distance_to_tss=-110 | ||
|end=27251451 | |end=27251451 | ||
| + | |end_of_center_position=27251446 | ||
|entrez_id=6144 | |entrez_id=6144 | ||
|gc_percent=0.567164 | |gc_percent=0.567164 | ||
| − | |gene_alias=HYPT12 | + | |gene_alias=HYPT12 |
|gene_description=ribosomal protein L21 | |gene_description=ribosomal protein L21 | ||
|gene_id=6144 | |gene_id=6144 | ||
| Line 24: | Line 26: | ||
|species=human | |species=human | ||
|start=27251439 | |start=27251439 | ||
| + | |start_of_center_position=27251445 | ||
|strand=+ | |strand=+ | ||
|transcript_name=ENST00000473558.5 uc058waf.1 | |transcript_name=ENST00000473558.5 uc058waf.1 | ||
Revision as of 16:56, 13 May 2019
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 27251445 |
|---|---|
| End of the center position in the TSS region: | 27251446 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000473558.5 uc058waf.1 |
|---|---|
| Distance: | -78 |
| Num_trans: | 14 |
| All_trans: | ENST00000473558.5:-78 uc058waf.1:-78 NM_000982:104 ENST00000461690.5:110 uc058wag.1:110 L25348:118 ENST00000272274.8:128 uc058wah.1:128 ENST00000311549.10:-131 uc001ura.4:-131 ENST00000319826.8:132 uc058wai.1:132 ENST00000326092.8:146 uc058waj.1:146 |
TATA-Box annotation
| Distance to TSS: | -110 |
|---|---|
| Nearest PromoterID: | NM_000982 |
| Entrez ID: | 6144 |
| Nearest Unigene: | Hs.381123 |
| Nearest Refseq: | NM_000982 |
| Nearest Ensembl: | ENSG00000122026 |
| Gene Name: | ribosomal protein L21 |
| Gene Alias: | HYPT12 |
| Gene Description: | ribosomal protein L21 |
| Gene Type: | protein-coding |
| CpG%: | 0.075 |
| GC%: | 0.567164 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
