Difference between revisions of "TSS:Hg 134534.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENST00000621089.2:0 uc010aam.4:0 AK307356:0 ENST00000626064.1:-187 uc058wbn.1:-187 ENST00000627604.1:-202 NM_001206559:-202 uc058wbm.1:-202 ENST00000626...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |POLR1C= | ||
| + | |RPA16= | ||
| + | |RPA9= | ||
| + | |RPAC2= | ||
| + | |RPC16= | ||
| + | |RPO1-3= | ||
| + | |TCS2= | ||
|all_trans=ENST00000621089.2:0 uc010aam.4:0 AK307356:0 ENST00000626064.1:-187 uc058wbn.1:-187 ENST00000627604.1:-202 NM_001206559:-202 uc058wbm.1:-202 ENST00000626929.1:-203 uc058wbl.1:-203 ENST00000302979.4:459 uc001uro.4:459 | |all_trans=ENST00000621089.2:0 uc010aam.4:0 AK307356:0 ENST00000626064.1:-187 uc058wbn.1:-187 ENST00000627604.1:-202 NM_001206559:-202 uc058wbm.1:-202 ENST00000626929.1:-203 uc058wbl.1:-203 ENST00000302979.4:459 uc001uro.4:459 | ||
|chr=chr13 | |chr=chr13 | ||
| Line 6: | Line 13: | ||
|distance_to_tss=211 | |distance_to_tss=211 | ||
|end=27620963 | |end=27620963 | ||
| + | |end_of_center_position=27620954 | ||
|entrez_id=51082 | |entrez_id=51082 | ||
|gc_percent=0.666667 | |gc_percent=0.666667 | ||
| − | |gene_alias=AC19 | + | |gene_alias=AC19 |
|gene_description=RNA polymerase I subunit D | |gene_description=RNA polymerase I subunit D | ||
|gene_id=51082 | |gene_id=51082 | ||
| Line 24: | Line 32: | ||
|species=human | |species=human | ||
|start=27620944 | |start=27620944 | ||
| + | |start_of_center_position=27620953 | ||
|strand=+ | |strand=+ | ||
|transcript_name=ENST00000621089.2 uc010aam.4 AK307356 | |transcript_name=ENST00000621089.2 uc010aam.4 AK307356 | ||
Revision as of 16:59, 13 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 27620953 |
|---|---|
| End of the center position in the TSS region: | 27620954 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000621089.2 uc010aam.4 AK307356 |
|---|---|
| Distance: | 0 |
| Num_trans: | 12 |
| All_trans: | ENST00000621089.2:0 uc010aam.4:0 AK307356:0 ENST00000626064.1:-187 uc058wbn.1:-187 ENST00000627604.1:-202 NM_001206559:-202 uc058wbm.1:-202 ENST00000626929.1:-203 uc058wbl.1:-203 ENST00000302979.4:459 uc001uro.4:459 |
TATA-Box annotation
| Distance to TSS: | 211 |
|---|---|
| Nearest PromoterID: | NM_001206559 |
| Entrez ID: | 51082 |
| Nearest Unigene: | Hs.507584 |
| Nearest Refseq: | NM_015972 |
| Nearest Ensembl: | ENSG00000186184 |
| Gene Name: | polymerase (RNA) I subunit D |
| Gene Alias: | AC19 |
| Gene Description: | RNA polymerase I subunit D |
| Gene Type: | protein-coding |
| CpG%: | 0.075 |
| GC%: | 0.666667 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
