Difference between revisions of "TSS:Hg 105675.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.11 |distance_to_tss=104 |entrez_id=6229 |gc_percent=0.641791 |gene_alias=DBA3|S24 |gene_description=ribosomal protein S24 |gene_name=RPS24 |gene_typ...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |S24= | ||
| + | |all_trans=ENST00000478655.5:0 ENST00000372360.7:0 uc057uke.1:0 uc001jzq.4:0 D28424:0 AK311776:0 AK311910:0 BX537975:0 M31520:0 ENST00000464716.5:1 uc057ukf.1:1 BX647260:1 ENST00000476545.5:5 uc057ukg.1:5 BC071926:5 AF147330:6 ENST00000360830.8:10 uc001jzp.4:10 BC000523:10 ENST00000485708.6:-11 uc057ukd.1:-11 ENST00000466129.5:13 uc057ukh.1:13 BC003149:14 ENST00000475468.5:31 uc057uki.1:31 ENST00000482069.5:44 uc057ukj.1:44 ENST00000613865.4:-95 ENST00000435275.5:-95 ENST00000440692.5:-95 NM_001026:-95 NM_033022:-95 NM_001142285:-95 NM_001142284:-95 NM_001142283:-95 NM_001142282:-95 uc057ukb.1:-95 uc057ukc.1:-95 uc001jzs.4:-95 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.11 | |cpg_percent=0.11 | ||
| + | |distance=0 | ||
|distance_to_tss=104 | |distance_to_tss=104 | ||
| + | |end=78033873 | ||
|entrez_id=6229 | |entrez_id=6229 | ||
|gc_percent=0.641791 | |gc_percent=0.641791 | ||
|gene_alias=DBA3|S24 | |gene_alias=DBA3|S24 | ||
|gene_description=ribosomal protein S24 | |gene_description=ribosomal protein S24 | ||
| − | |gene_name=RPS24 | + | |gene_id=6229 |
| + | |gene_name=ribosomal protein S24 | ||
| + | |gene_source=HGNC:10411 | ||
| + | |gene_symbol=RPS24 | ||
| + | |gene_synonyms=S24 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:10411 | ||
|nearest_ensembl=ENSG00000138326 | |nearest_ensembl=ENSG00000138326 | ||
|nearest_promoter_id=NM_033022 | |nearest_promoter_id=NM_033022 | ||
|nearest_refseq=NM_001026 | |nearest_refseq=NM_001026 | ||
|nearest_unigene=Hs.280130 | |nearest_unigene=Hs.280130 | ||
| + | |num_trans=40 | ||
| + | |species=human | ||
| + | |start=78033854 | ||
| + | |strand=+ | ||
| + | |transcript_name=ENST00000478655.5 ENST00000372360.7 uc057uke.1 uc001jzq.4 D28424 AK311776 AK311910 BX537975 M31520 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_105675.1 | |tss_id=hg_105675.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=A2N8M3 P62847 | ||
}} | }} | ||
Revision as of 21:45, 8 March 2018
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000478655.5 ENST00000372360.7 uc057uke.1 uc001jzq.4 D28424 AK311776 AK311910 BX537975 M31520 |
|---|---|
| Distance: | 0 |
| Num_trans: | 40 |
| All_trans: | ENST00000478655.5:0 ENST00000372360.7:0 uc057uke.1:0 uc001jzq.4:0 D28424:0 AK311776:0 AK311910:0 BX537975:0 M31520:0 ENST00000464716.5:1 uc057ukf.1:1 BX647260:1 ENST00000476545.5:5 uc057ukg.1:5 BC071926:5 AF147330:6 ENST00000360830.8:10 uc001jzp.4:10 BC000523:10 ENST00000485708.6:-11 uc057ukd.1:-11 ENST00000466129.5:13 uc057ukh.1:13 BC003149:14 ENST00000475468.5:31 uc057uki.1:31 ENST00000482069.5:44 uc057ukj.1:44 ENST00000613865.4:-95 ENST00000435275.5:-95 ENST00000440692.5:-95 NM_001026:-95 NM_033022:-95 NM_001142285:-95 NM_001142284:-95 NM_001142283:-95 NM_001142282:-95 uc057ukb.1:-95 uc057ukc.1:-95 uc001jzs.4:-95 |
TATA-Box annotation
| Distance to TSS: | 104 |
|---|---|
| Nearest PromoterID: | NM_033022 |
| Entrez ID: | 6229 |
| Nearest Unigene: | Hs.280130 |
| Nearest Refseq: | NM_001026 |
| Nearest Ensembl: | ENSG00000138326 |
| Gene Name: | ribosomal protein S24 |
| Gene Alias: | DBA3 |
| Gene Description: | ribosomal protein S24 |
| Gene Type: | protein-coding |
| CpG%: | 0.11 |
| GC%: | 0.641791 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
