Difference between revisions of "TSS:Hg 10056.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|NET6= | |NET6= | ||
| − | |all_trans=ENST00000377705. | + | |all_trans=ENST00000377705.6:0 NM_024654:0 AK091284:0 AK289653:0 BC110849:0 HQ258631:3 KJ899555:3 KJ901072:3 ENST00000464665.1:6 LF383933:-56 MA619510:-56 BC105095:-56 BC112278:-56 BC143646:-56 |
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.11 | |cpg_percent=0.11 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=-11 |
|end=6554542 | |end=6554542 | ||
|end_of_center_position=6554524 | |end_of_center_position=6554524 | ||
|entrez_id=79707 | |entrez_id=79707 | ||
|gc_percent=0.721393 | |gc_percent=0.721393 | ||
| − | |gene_alias=Grc3 | + | |gene_alias=Grc3|NET6 |
|gene_description=nucleolar protein 9 | |gene_description=nucleolar protein 9 | ||
|gene_id=79707 | |gene_id=79707 | ||
| Line 28: | Line 28: | ||
|start_of_center_position=6554523 | |start_of_center_position=6554523 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000377705. | + | |transcript_name=ENST00000377705.6 NM_024654 AK091284 AK289653 BC110849 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_10056.1 | |tss_id=hg_10056.1 | ||
Revision as of 15:22, 15 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 6554523 |
|---|---|
| End of the center position in the TSS region: | 6554524 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000377705.6 NM_024654 AK091284 AK289653 BC110849 |
|---|---|
| Distance: | 0 |
| Num_trans: | 14 |
| All_trans: | ENST00000377705.6:0 NM_024654:0 AK091284:0 AK289653:0 BC110849:0 HQ258631:3 KJ899555:3 KJ901072:3 ENST00000464665.1:6 LF383933:-56 MA619510:-56 BC105095:-56 BC112278:-56 BC143646:-56 |
TATA-Box annotation
| Distance to TSS: | -11 |
|---|---|
| Nearest PromoterID: | NM_024654 |
| Entrez ID: | 79707 |
| Nearest Unigene: | Hs.59425 |
| Nearest Refseq: | NM_024654 |
| Nearest Ensembl: | ENSG00000162408 |
| Gene Name: | nucleolar protein 9 |
| Gene Alias: | Grc3 |
| Gene Description: | nucleolar protein 9 |
| Gene Type: | protein-coding |
| CpG%: | 0.11 |
| GC%: | 0.721393 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
