Difference between revisions of "TSS:Hg 10430.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=DQ578456:76 | + | |all_trans=ENST00000666654.1:0 ENST00000661613.1:0 ENST00000657979.1:0 ENST00000670776.1:0 NR_149058:0 ENST00000665002.1:4 DQ578456:76 ENST00000447908.3:381 |
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.02 | |cpg_percent=0.02 | ||
| − | |distance= | + | |distance=0 |
| − | |distance_to_tss= | + | |distance_to_tss=1 |
|end=14419974 | |end=14419974 | ||
|end_of_center_position=14419972 | |end_of_center_position=14419972 | ||
| − | |entrez_id= | + | |entrez_id=105376762 |
|gc_percent=0.487562 | |gc_percent=0.487562 | ||
| − | |gene_alias= | + | |gene_alias=- |
| − | |gene_description= | + | |gene_description=KAZN antisense RNA 1 |
| − | |gene_name=KAZN | + | |gene_id=105376762 |
| − | |gene_type= | + | |gene_name=KAZN antisense RNA 1 |
| − | |nearest_ensembl= | + | |gene_source=HGNC:53610 |
| − | |nearest_promoter_id= | + | |gene_symbol=KAZN-AS1 |
| − | |nearest_refseq= | + | |gene_synonyms=ENST00000447908 |
| − | |nearest_unigene=Hs. | + | |gene_type=ncRNA |
| − | |num_trans= | + | |hgnc_mgi_id=HGNC:53610 |
| + | |nearest_ensembl= | ||
| + | |nearest_promoter_id=NR_149058 | ||
| + | |nearest_refseq=NR_149058 | ||
| + | |nearest_unigene=Hs.568591 | ||
| + | |num_trans=8 | ||
|species=human | |species=human | ||
|start=14419969 | |start=14419969 | ||
|start_of_center_position=14419971 | |start_of_center_position=14419971 | ||
|strand=- | |strand=- | ||
| − | |tata_box= | + | |tata_box=-43(GTCCAGATAAGG,-,0.00) |
| − | |transcript_name= | + | |transcript_name=ENST00000666654.1 ENST00000661613.1 ENST00000657979.1 ENST00000670776.1 NR_149058 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_10430.1 | |tss_id=hg_10430.1 | ||
|tss_score=1 | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 17:47, 15 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 14419971 |
|---|---|
| End of the center position in the TSS region: | 14419972 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000666654.1 ENST00000661613.1 ENST00000657979.1 ENST00000670776.1 NR_149058 |
|---|---|
| Distance: | 0 |
| Num_trans: | 8 |
| All_trans: | ENST00000666654.1:0 ENST00000661613.1:0 ENST00000657979.1:0 ENST00000670776.1:0 NR_149058:0 ENST00000665002.1:4 DQ578456:76 ENST00000447908.3:381 |
TATA-Box annotation
| Distance to TSS: | 1 |
|---|---|
| Nearest PromoterID: | NR_149058 |
| Entrez ID: | 105376762 |
| Nearest Unigene: | Hs.568591 |
| Nearest Refseq: | NR_149058 |
| Nearest Ensembl: | |
| Gene Name: | KAZN antisense RNA 1 |
| Gene Alias: | - |
| Gene Description: | KAZN antisense RNA 1 |
| Gene Type: | ncRNA |
| CpG%: | 0.02 |
| GC%: | 0.487562 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -43(GTCCAGATAAGG,-,0.00) |
