Difference between revisions of "TSS:Hg 10769.1"
From referenceTSS
| Line 5: | Line 5: | ||
|OST48= | |OST48= | ||
|WBP1= | |WBP1= | ||
| − | |all_trans= | + | |all_trans=D29643:0 AK315633:-10 AK297009:20 ENST00000415136.6:-30 BC002594:39 AK296041:86 KJ896696:89 AB383753:89 DQ891927:89 DQ895114:89 CU678058:89 ENST00000464364.1:102 AB062391:113 ENST00000602624.7:121 ENST00000477229.1:121 NM_005216:121 |
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.095 | |cpg_percent=0.095 | ||
| Line 14: | Line 14: | ||
|entrez_id=1650 | |entrez_id=1650 | ||
|gc_percent=0.636816 | |gc_percent=0.636816 | ||
| − | |gene_alias=AGER1 | + | |gene_alias=AGER1{{!}}CDG1R{{!}}GATD6{{!}}OKSWcl45{{!}}OST{{!}}OST48{{!}}WBP1 |
|gene_description=dolichyl-diphosphooligosaccharide--protein glycosyltransferase non-catalytic subunit | |gene_description=dolichyl-diphosphooligosaccharide--protein glycosyltransferase non-catalytic subunit | ||
|gene_id=1650 | |gene_id=1650 | ||
| Line 20: | Line 20: | ||
|gene_source=HGNC:2728 | |gene_source=HGNC:2728 | ||
|gene_symbol=DDOST | |gene_symbol=DDOST | ||
| − | |gene_synonyms=KIAA0115 OST OST48 WBP1 | + | |gene_synonyms=GATD6 KIAA0115 OST OST48 WBP1 |
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=HGNC:2728 | |hgnc_mgi_id=HGNC:2728 | ||
| Line 27: | Line 27: | ||
|nearest_refseq=NM_005216 | |nearest_refseq=NM_005216 | ||
|nearest_unigene=Hs.523145 | |nearest_unigene=Hs.523145 | ||
| − | |num_trans= | + | |num_trans=16 |
|species=human | |species=human | ||
|start=20661489 | |start=20661489 | ||
|start_of_center_position=20661501 | |start_of_center_position=20661501 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=D29643 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_10769.1 | |tss_id=hg_10769.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id= |
}} | }} | ||
Revision as of 19:06, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 20661501 |
|---|---|
| End of the center position in the TSS region: | 20661502 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | D29643 |
|---|---|
| Distance: | 0 |
| Num_trans: | 16 |
| All_trans: | D29643:0 AK315633:-10 AK297009:20 ENST00000415136.6:-30 BC002594:39 AK296041:86 KJ896696:89 AB383753:89 DQ891927:89 DQ895114:89 CU678058:89 ENST00000464364.1:102 AB062391:113 ENST00000602624.7:121 ENST00000477229.1:121 NM_005216:121 |
TATA-Box annotation
| Distance to TSS: | 42 |
|---|---|
| Nearest PromoterID: | NM_005216 |
| Entrez ID: | 1650 |
| Nearest Unigene: | Hs.523145 |
| Nearest Refseq: | NM_005216 |
| Nearest Ensembl: | ENSG00000244038 |
| Gene Name: | dolichyl-diphosphooligosaccharide--protein glycosyltransferase non-catalytic subunit |
| Gene Alias: | AGER1|CDG1R|GATD6|OKSWcl45|OST|OST48|WBP1 |
| Gene Description: | dolichyl-diphosphooligosaccharide--protein glycosyltransferase non-catalytic subunit |
| Gene Type: | protein-coding |
| CpG%: | 0.095 |
| GC%: | 0.636816 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
