Difference between revisions of "TSS:Hg 140411.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=AB464295:71 BC160145:71 BC047950:-84 ENST00000256367.2:-262 NM_015351:-262 uc001xmi.2:-262 D86980:-262 |chr=chr14 |cpg_percent=0.185 |distance=71 |dista...") |
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|distance_to_tss=267 | |distance_to_tss=267 | ||
|end=70642059 | |end=70642059 | ||
| + | |end_of_center_position=70642054 | ||
|entrez_id=23508 | |entrez_id=23508 | ||
|gc_percent=0.79602 | |gc_percent=0.79602 | ||
| Line 24: | Line 25: | ||
|species=human | |species=human | ||
|start=70642048 | |start=70642048 | ||
| + | |start_of_center_position=70642053 | ||
|strand=+ | |strand=+ | ||
|tata_box="-6(GCTTTTAAACCC,+,0.00)" | |tata_box="-6(GCTTTTAAACCC,+,0.00)" | ||
Revision as of 03:02, 14 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 70642053 |
|---|---|
| End of the center position in the TSS region: | 70642054 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | AB464295 BC160145 |
|---|---|
| Distance: | 71 |
| Num_trans: | 7 |
| All_trans: | AB464295:71 BC160145:71 BC047950:-84 ENST00000256367.2:-262 NM_015351:-262 uc001xmi.2:-262 D86980:-262 |
TATA-Box annotation
| Distance to TSS: | 267 |
|---|---|
| Nearest PromoterID: | NM_015351 |
| Entrez ID: | 23508 |
| Nearest Unigene: | Hs.79170 |
| Nearest Refseq: | NM_015351 |
| Nearest Ensembl: | ENSG00000133985 |
| Gene Name: | tetratricopeptide repeat domain 9 |
| Gene Alias: | TTC9A |
| Gene Description: | tetratricopeptide repeat domain 9 |
| Gene Type: | protein-coding |
| CpG%: | 0.185 |
| GC%: | 0.79602 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-6(GCTTTTAAACCC,+,0.00)" |
