Difference between revisions of "TSS:Hg 89219.1"
From referenceTSS
| Line 2: | Line 2: | ||
|SGK2= | |SGK2= | ||
|SGKL= | |SGKL= | ||
| − | |all_trans=ENST00000523401.5:0 ENST00000494528.2:0 | + | |all_trans=ENST00000523401.5:0 ENST00000494528.2:0 ENST00000521198.7:0 NM_001033578:0 CR933673:0 AK291428:-311 |
|chr=chr8 | |chr=chr8 | ||
|cpg_percent=0.18 | |cpg_percent=0.18 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=-12 |
|end=66712810 | |end=66712810 | ||
|end_of_center_position=66712770 | |end_of_center_position=66712770 | ||
|entrez_id=23678 | |entrez_id=23678 | ||
|gc_percent=0.80597 | |gc_percent=0.80597 | ||
| − | |gene_alias=CISK | + | |gene_alias=CISK{{!}}SGK2{{!}}SGKL |
|gene_description=serum/glucocorticoid regulated kinase family member 3 | |gene_description=serum/glucocorticoid regulated kinase family member 3 | ||
|gene_id=23678 | |gene_id=23678 | ||
| Line 24: | Line 24: | ||
|nearest_refseq=NM_013257 | |nearest_refseq=NM_013257 | ||
|nearest_unigene=Hs.613417 | |nearest_unigene=Hs.613417 | ||
| − | |num_trans= | + | |num_trans=6 |
|species=human | |species=human | ||
|start=66712728 | |start=66712728 | ||
|start_of_center_position=66712769 | |start_of_center_position=66712769 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENST00000523401.5 ENST00000494528.2 | + | |transcript_name=ENST00000523401.5 ENST00000494528.2 ENST00000521198.7 NM_001033578 CR933673 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_89219.1 | |tss_id=hg_89219.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id=Q5H9Q5 | + | |uniprot_id=A0A024R807 Q5H9Q5 Q96BR1 |
}} | }} | ||
Revision as of 18:06, 18 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 66712769 |
|---|---|
| End of the center position in the TSS region: | 66712770 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000523401.5 ENST00000494528.2 ENST00000521198.7 NM_001033578 CR933673 |
|---|---|
| Distance: | 0 |
| Num_trans: | 6 |
| All_trans: | ENST00000523401.5:0 ENST00000494528.2:0 ENST00000521198.7:0 NM_001033578:0 CR933673:0 AK291428:-311 |
TATA-Box annotation
| Distance to TSS: | -12 |
|---|---|
| Nearest PromoterID: | NM_001033578 |
| Entrez ID: | 23678 |
| Nearest Unigene: | Hs.613417 |
| Nearest Refseq: | NM_013257 |
| Nearest Ensembl: | ENSG00000104205 |
| Gene Name: | serum/glucocorticoid regulated kinase family member 3 |
| Gene Alias: | CISK|SGK2|SGKL |
| Gene Description: | serum/glucocorticoid regulated kinase family member 3 |
| Gene Type: | protein-coding |
| CpG%: | 0.18 |
| GC%: | 0.80597 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
