Difference between revisions of "TSS:Hg 181577.1"
From referenceTSS
| Line 2: | Line 2: | ||
|DMR-N9= | |DMR-N9= | ||
|DMRN9= | |DMRN9= | ||
| − | |all_trans= | + | |all_trans=ENST00000270223.7:88 NM_004943:88 ENST00000377735.7:131 ENST00000601370.1:160 BC156311:170 ENST00000598237.1:496 |
|chr=chr19 | |chr=chr19 | ||
|cpg_percent=0.11 | |cpg_percent=0.11 | ||
| − | |distance= | + | |distance=88 |
| − | |distance_to_tss=- | + | |distance_to_tss=-96 |
|end=45792949 | |end=45792949 | ||
|end_of_center_position=45792941 | |end_of_center_position=45792941 | ||
| Line 12: | Line 12: | ||
|gc_percent=0.676617 | |gc_percent=0.676617 | ||
|gene59= | |gene59= | ||
| − | |gene_alias=D19S593E | + | |gene_alias=D19S593E{{!}}DMR-N9{{!}}DMRN9{{!}}gene59 |
| − | |gene_description= | + | |gene_description=DM1 locus, WD repeat containing |
|gene_id=1762 | |gene_id=1762 | ||
| − | |gene_name= | + | |gene_name=DM1 locus, WD repeat containing |
|gene_source=HGNC:2936 | |gene_source=HGNC:2936 | ||
|gene_symbol=DMWD | |gene_symbol=DMWD | ||
| Line 25: | Line 25: | ||
|nearest_refseq=NM_004943 | |nearest_refseq=NM_004943 | ||
|nearest_unigene=Hs.515474 | |nearest_unigene=Hs.515474 | ||
| − | |num_trans= | + | |num_trans=6 |
|species=human | |species=human | ||
|start=45792932 | |start=45792932 | ||
|start_of_center_position=45792940 | |start_of_center_position=45792940 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=ENST00000270223.7 NM_004943 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_181577.1 | |tss_id=hg_181577.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id=Q09019 Q8WUW6 |
}} | }} | ||
Revision as of 23:34, 16 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 45792940 |
|---|---|
| End of the center position in the TSS region: | 45792941 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000270223.7 NM_004943 |
|---|---|
| Distance: | 88 |
| Num_trans: | 6 |
| All_trans: | ENST00000270223.7:88 NM_004943:88 ENST00000377735.7:131 ENST00000601370.1:160 BC156311:170 ENST00000598237.1:496 |
TATA-Box annotation
| Distance to TSS: | -96 |
|---|---|
| Nearest PromoterID: | NM_004943 |
| Entrez ID: | 1762 |
| Nearest Unigene: | Hs.515474 |
| Nearest Refseq: | NM_004943 |
| Nearest Ensembl: | ENSG00000185800 |
| Gene Name: | DM1 locus, WD repeat containing |
| Gene Alias: | D19S593E|DMR-N9|DMRN9|gene59 |
| Gene Description: | DM1 locus, WD repeat containing |
| Gene Type: | protein-coding |
| CpG%: | 0.11 |
| GC%: | 0.676617 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
