Difference between revisions of "TSS:Hg 106313.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.015 |distance_to_tss=230 |entrez_id=51196 |gc_percent=0.522388 |gene_alias=NPHS3|PLCE|PPLC |gene_description=phospholipase C epsilon 1 |gene_name=PL...") |
|||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |PLCE= | ||
| + | |PPLC= | ||
| + | |all_trans=ENST00000371375.1:-145 uc001kjp.4:-145 AF170071:-145 AK289852:-167 AK297779:-185 ENST00000371385.7:-214 NM_001165979:-214 uc001kjm.5:-214 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
| + | |distance=-145 | ||
|distance_to_tss=230 | |distance_to_tss=230 | ||
| + | |end=94089272 | ||
|entrez_id=51196 | |entrez_id=51196 | ||
|gc_percent=0.522388 | |gc_percent=0.522388 | ||
|gene_alias=NPHS3|PLCE|PPLC | |gene_alias=NPHS3|PLCE|PPLC | ||
|gene_description=phospholipase C epsilon 1 | |gene_description=phospholipase C epsilon 1 | ||
| − | |gene_name=PLCE1 | + | |gene_id=51196 |
| + | |gene_name=phospholipase C epsilon 1 | ||
| + | |gene_source=HGNC:17175 | ||
| + | |gene_symbol=PLCE1 | ||
| + | |gene_synonyms=KIAA1516 NPHS3 PLCE | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:17175 | ||
|nearest_ensembl=ENSG00000138193 | |nearest_ensembl=ENSG00000138193 | ||
|nearest_promoter_id=NM_001165979 | |nearest_promoter_id=NM_001165979 | ||
|nearest_refseq=NM_016341 | |nearest_refseq=NM_016341 | ||
|nearest_unigene=Hs.655033 | |nearest_unigene=Hs.655033 | ||
| + | |num_trans=8 | ||
| + | |species=human | ||
| + | |start=94089239 | ||
| + | |strand=+ | ||
| + | |transcript_name=ENST00000371375.1 uc001kjp.4 AF170071 | ||
| + | |tss_classification=no | ||
|tss_id=hg_106313.1 | |tss_id=hg_106313.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=Q9P212 | ||
}} | }} | ||
Revision as of 22:13, 8 March 2018
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000371375.1 uc001kjp.4 AF170071 |
|---|---|
| Distance: | -145 |
| Num_trans: | 8 |
| All_trans: | ENST00000371375.1:-145 uc001kjp.4:-145 AF170071:-145 AK289852:-167 AK297779:-185 ENST00000371385.7:-214 NM_001165979:-214 uc001kjm.5:-214 |
TATA-Box annotation
| Distance to TSS: | 230 |
|---|---|
| Nearest PromoterID: | NM_001165979 |
| Entrez ID: | 51196 |
| Nearest Unigene: | Hs.655033 |
| Nearest Refseq: | NM_016341 |
| Nearest Ensembl: | ENSG00000138193 |
| Gene Name: | phospholipase C epsilon 1 |
| Gene Alias: | NPHS3 |
| Gene Description: | phospholipase C epsilon 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.522388 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
