Difference between revisions of "TSS:Hg 18560.1"
From referenceTSS
| Line 2: | Line 2: | ||
|TDH2A= | |TDH2A= | ||
|TPX= | |TPX= | ||
| − | |all_trans=ENST00000497517.6 | + | |all_trans=ENST00000650224.1:285 ENST00000497517.6:442 AK309868:442 |
|chr=chr2 | |chr=chr2 | ||
|cpg_percent=0.035 | |cpg_percent=0.035 | ||
| − | |distance= | + | |distance=285 |
|distance_to_tss=-39684 | |distance_to_tss=-39684 | ||
|end=1373781 | |end=1373781 | ||
| Line 11: | Line 11: | ||
|entrez_id=7173 | |entrez_id=7173 | ||
|gc_percent=0.527363 | |gc_percent=0.527363 | ||
| − | |gene_alias=MSA | + | |gene_alias=MSA{{!}}TDH2A{{!}}TPX |
|gene_description=thyroid peroxidase | |gene_description=thyroid peroxidase | ||
|gene_id=7173 | |gene_id=7173 | ||
| Line 29: | Line 29: | ||
|start_of_center_position=1373776 | |start_of_center_position=1373776 | ||
|strand=+ | |strand=+ | ||
| − | |tata_box= | + | |tata_box=-90(GTATTTAAAAGC,-,0.00) |
| − | |transcript_name= | + | |transcript_name=ENST00000650224.1 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_18560.1 | |tss_id=hg_18560.1 | ||
Revision as of 01:07, 17 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 1373776 |
|---|---|
| End of the center position in the TSS region: | 1373777 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000650224.1 |
|---|---|
| Distance: | 285 |
| Num_trans: | 3 |
| All_trans: | ENST00000650224.1:285 ENST00000497517.6:442 AK309868:442 |
TATA-Box annotation
| Distance to TSS: | -39684 |
|---|---|
| Nearest PromoterID: | NM_001206745 |
| Entrez ID: | 7173 |
| Nearest Unigene: | Hs.467554 |
| Nearest Refseq: | NM_000547 |
| Nearest Ensembl: | ENSG00000115705 |
| Gene Name: | thyroid peroxidase |
| Gene Alias: | MSA|TDH2A|TPX |
| Gene Description: | thyroid peroxidase |
| Gene Type: | protein-coding |
| CpG%: | 0.035 |
| GC%: | 0.527363 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | -90(GTATTTAAAAGC,-,0.00) |
