Difference between revisions of "TSS:Hg 106353.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.005 |distance_to_tss=10 |entrez_id=142827 |gc_percent=0.472637 |gene_alias=C10orf129|bA310E22.3 |gene_description=acyl-CoA synthetase medium-chain f...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=ENST00000327739.7:-7 ENST00000341686.7:-7 NM_207321:-7 uc057vab.1:-7 uc001kke.4:-7 AK126134:-7 ENST00000404473.6:263 ENST00000394005.3:263 uc057vac.1:263 uc057vad.1:263 BC104210:263 BC104211:263 BC112988:263 BC148184:263 | ||
| + | |bA310E22.3= | ||
| + | |chr=chr10 | ||
|cpg_percent=0.005 | |cpg_percent=0.005 | ||
| + | |distance=-7 | ||
|distance_to_tss=10 | |distance_to_tss=10 | ||
| + | |end=95194214 | ||
|entrez_id=142827 | |entrez_id=142827 | ||
|gc_percent=0.472637 | |gc_percent=0.472637 | ||
|gene_alias=C10orf129|bA310E22.3 | |gene_alias=C10orf129|bA310E22.3 | ||
|gene_description=acyl-CoA synthetase medium-chain family member 6 | |gene_description=acyl-CoA synthetase medium-chain family member 6 | ||
| − | |gene_name=ACSM6 | + | |gene_id=142827 |
| + | |gene_name=acyl-CoA synthetase medium-chain family member 6 | ||
| + | |gene_source=HGNC:31665 | ||
| + | |gene_symbol=ACSM6 | ||
| + | |gene_synonyms=bA310E22.3 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:31665 | ||
|nearest_ensembl=ENSG00000173124 | |nearest_ensembl=ENSG00000173124 | ||
|nearest_promoter_id=NM_207321 | |nearest_promoter_id=NM_207321 | ||
|nearest_refseq=NM_207321 | |nearest_refseq=NM_207321 | ||
|nearest_unigene=Hs.134229 | |nearest_unigene=Hs.134229 | ||
| + | |num_trans=14 | ||
| + | |species=human | ||
| + | |start=95194206 | ||
| + | |strand=+ | ||
|tata_box="-95(CCTTTTAGGCTT,+,0.00),-5(AACTATAAGAGG,-,0.00)" | |tata_box="-95(CCTTTTAGGCTT,+,0.00),-5(AACTATAAGAGG,-,0.00)" | ||
| + | |transcript_name=ENST00000327739.7 ENST00000341686.7 NM_207321 uc057vab.1 uc001kke.4 AK126134 | ||
| + | |tss_classification=no | ||
|tss_id=hg_106353.1 | |tss_id=hg_106353.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=H7BXS6 Q6P461 | ||
}} | }} | ||
Revision as of 22:15, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000327739.7 ENST00000341686.7 NM_207321 uc057vab.1 uc001kke.4 AK126134 |
|---|---|
| Distance: | -7 |
| Num_trans: | 14 |
| All_trans: | ENST00000327739.7:-7 ENST00000341686.7:-7 NM_207321:-7 uc057vab.1:-7 uc001kke.4:-7 AK126134:-7 ENST00000404473.6:263 ENST00000394005.3:263 uc057vac.1:263 uc057vad.1:263 BC104210:263 BC104211:263 BC112988:263 BC148184:263 |
TATA-Box annotation
| Distance to TSS: | 10 |
|---|---|
| Nearest PromoterID: | NM_207321 |
| Entrez ID: | 142827 |
| Nearest Unigene: | Hs.134229 |
| Nearest Refseq: | NM_207321 |
| Nearest Ensembl: | ENSG00000173124 |
| Gene Name: | acyl-CoA synthetase medium-chain family member 6 |
| Gene Alias: | C10orf129 |
| Gene Description: | acyl-CoA synthetase medium-chain family member 6 |
| Gene Type: | protein-coding |
| CpG%: | 0.005 |
| GC%: | 0.472637 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-95(CCTTTTAGGCTT,+,0.00),-5(AACTATAAGAGG,-,0.00)" |
