Difference between revisions of "TSS:Hg 100555.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENST00000626300.1:0 NR_109756 | + | |all_trans=ENST00000626300.1:0 NR_109756:0 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.055 | |cpg_percent=0.055 | ||
| Line 9: | Line 9: | ||
|entrez_id=101926900 | |entrez_id=101926900 | ||
|gc_percent=0.547264 | |gc_percent=0.547264 | ||
| − | |gene_alias=- | + | |gene_alias=DNAJB5-AS1 |
| − | |gene_description=DNAJB5 | + | |gene_description=DNAJB5 divergent transcript |
|gene_id=101926900 | |gene_id=101926900 | ||
| − | |gene_name=DNAJB5 | + | |gene_name=DNAJB5 divergent transcript |
|gene_source=HGNC:49846 | |gene_source=HGNC:49846 | ||
| − | |gene_symbol=DNAJB5- | + | |gene_symbol=DNAJB5-DT |
|gene_synonyms= | |gene_synonyms= | ||
|gene_type=ncRNA | |gene_type=ncRNA | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NR_109756 | |nearest_refseq=NR_109756 | ||
|nearest_unigene=Hs.545814 | |nearest_unigene=Hs.545814 | ||
| − | |num_trans= | + | |num_trans=2 |
|species=human | |species=human | ||
|start=34989369 | |start=34989369 | ||
|start_of_center_position=34989376 | |start_of_center_position=34989376 | ||
|strand=- | |strand=- | ||
| − | |tata_box= | + | |tata_box=89(CAGCCTTAAAGG,-,0.00) |
| − | |transcript_name=ENST00000626300.1 NR_109756 | + | |transcript_name=ENST00000626300.1 NR_109756 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_100555.1 | |tss_id=hg_100555.1 | ||
Revision as of 15:22, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 34989376 |
|---|---|
| End of the center position in the TSS region: | 34989377 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000626300.1 NR_109756 |
|---|---|
| Distance: | 0 |
| Num_trans: | 2 |
| All_trans: | ENST00000626300.1:0 NR_109756:0 |
TATA-Box annotation
| Distance to TSS: | 3 |
|---|---|
| Nearest PromoterID: | NR_109756 |
| Entrez ID: | 101926900 |
| Nearest Unigene: | Hs.545814 |
| Nearest Refseq: | NR_109756 |
| Nearest Ensembl: | ENSG00000281491 |
| Gene Name: | DNAJB5 divergent transcript |
| Gene Alias: | DNAJB5-AS1 |
| Gene Description: | DNAJB5 divergent transcript |
| Gene Type: | ncRNA |
| CpG%: | 0.055 |
| GC%: | 0.547264 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | 89(CAGCCTTAAAGG,-,0.00) |
