Difference between revisions of "TSS:Hg 101186.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|NNA1= | |NNA1= | ||
| + | |all_trans=ENST00000662737.1:147 ENST00000661197.1:398 ENST00000648131.1:414 ENST00000669133.1:453 | ||
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.02 | |cpg_percent=0.02 | ||
| − | |distance= | + | |distance=147 |
|distance_to_tss=297646 | |distance_to_tss=297646 | ||
|end=85444390 | |end=85444390 | ||
| Line 9: | Line 10: | ||
|entrez_id=23287 | |entrez_id=23287 | ||
|gc_percent=0.452736 | |gc_percent=0.452736 | ||
| − | |gene_alias=CCP1 | + | |gene_alias=CCP1{{!}}CONDCA{{!}}NNA1 |
|gene_description=ATP/GTP binding protein 1 | |gene_description=ATP/GTP binding protein 1 | ||
|gene_name=AGTPBP1 | |gene_name=AGTPBP1 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|nearest_ensembl=ENSG00000135049 | |nearest_ensembl=ENSG00000135049 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001286717 |
|nearest_refseq=NM_015239 | |nearest_refseq=NM_015239 | ||
|nearest_unigene=Hs.719980 | |nearest_unigene=Hs.719980 | ||
| − | |num_trans= | + | |num_trans=4 |
|species=human | |species=human | ||
|start=85444376 | |start=85444376 | ||
|start_of_center_position=85444383 | |start_of_center_position=85444383 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=ENST00000662737.1 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_101186.1 | |tss_id=hg_101186.1 | ||
|tss_score=1 | |tss_score=1 | ||
}} | }} | ||
Latest revision as of 16:34, 15 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 85444383 |
|---|---|
| End of the center position in the TSS region: | 85444384 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000662737.1 |
|---|---|
| Distance: | 147 |
| Num_trans: | 4 |
| All_trans: | ENST00000662737.1:147 ENST00000661197.1:398 ENST00000648131.1:414 ENST00000669133.1:453 |
TATA-Box annotation
| Distance to TSS: | 297646 |
|---|---|
| Nearest PromoterID: | NM_001286717 |
| Entrez ID: | 23287 |
| Nearest Unigene: | Hs.719980 |
| Nearest Refseq: | NM_015239 |
| Nearest Ensembl: | ENSG00000135049 |
| Gene Name: | AGTPBP1 |
| Gene Alias: | CCP1|CONDCA|NNA1 |
| Gene Description: | ATP/GTP binding protein 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.02 |
| GC%: | 0.452736 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
