Difference between revisions of "TSS:Hg 106457.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.135 |distance_to_tss=77 |entrez_id=55361 |gc_percent=0.736318 |gene_alias=PI4KII|PIK42A |gene_description=phosphatidylinositol 4-kinase type 2 alpha...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |PIK42A= | ||
| + | |all_trans=BT007330:-15 DQ893758:-17 DQ893537:-17 BC003167:-44 ENST00000370631.3:-72 NM_018425:-72 uc001kog.2:-72 AJ303098:-72 | ||
| + | |chr=chr10 | ||
|cpg_percent=0.135 | |cpg_percent=0.135 | ||
| + | |distance=-15 | ||
|distance_to_tss=77 | |distance_to_tss=77 | ||
| + | |end=97640768 | ||
|entrez_id=55361 | |entrez_id=55361 | ||
|gc_percent=0.736318 | |gc_percent=0.736318 | ||
|gene_alias=PI4KII|PIK42A | |gene_alias=PI4KII|PIK42A | ||
|gene_description=phosphatidylinositol 4-kinase type 2 alpha | |gene_description=phosphatidylinositol 4-kinase type 2 alpha | ||
| − | |gene_name=PI4K2A | + | |gene_id=55361 |
| + | |gene_name=phosphatidylinositol 4-kinase type 2 alpha | ||
| + | |gene_source=HGNC:30031 | ||
| + | |gene_symbol=PI4K2A | ||
| + | |gene_synonyms=DKFZP761G1923 PI4KII PIK42A | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:30031 | ||
|nearest_ensembl=ENSG00000155252 | |nearest_ensembl=ENSG00000155252 | ||
|nearest_promoter_id=NM_018425 | |nearest_promoter_id=NM_018425 | ||
|nearest_refseq=NM_018425 | |nearest_refseq=NM_018425 | ||
|nearest_unigene=Hs.25300 | |nearest_unigene=Hs.25300 | ||
| + | |num_trans=8 | ||
| + | |species=human | ||
| + | |start=97640757 | ||
| + | |strand=+ | ||
| + | |transcript_name=BT007330 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_106457.1 | |tss_id=hg_106457.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 22:19, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | BT007330 |
|---|---|
| Distance: | -15 |
| Num_trans: | 8 |
| All_trans: | BT007330:-15 DQ893758:-17 DQ893537:-17 BC003167:-44 ENST00000370631.3:-72 NM_018425:-72 uc001kog.2:-72 AJ303098:-72 |
TATA-Box annotation
| Distance to TSS: | 77 |
|---|---|
| Nearest PromoterID: | NM_018425 |
| Entrez ID: | 55361 |
| Nearest Unigene: | Hs.25300 |
| Nearest Refseq: | NM_018425 |
| Nearest Ensembl: | ENSG00000155252 |
| Gene Name: | phosphatidylinositol 4-kinase type 2 alpha |
| Gene Alias: | PI4KII |
| Gene Description: | phosphatidylinositol 4-kinase type 2 alpha |
| Gene Type: | protein-coding |
| CpG%: | 0.135 |
| GC%: | 0.736318 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
