Difference between revisions of "TSS:Hg 14816.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENST00000304760. | + | |all_trans=ENST00000304760.3:0 NM_001010846:0 NR_135169:0 BC117210:353 BC143765:354 |
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.12 | |cpg_percent=0.12 | ||
| − | |distance= | + | |distance=0 |
| − | |distance_to_tss= | + | |distance_to_tss=-14 |
|end=154502449 | |end=154502449 | ||
|end_of_center_position=154502426 | |end_of_center_position=154502426 | ||
| − | |entrez_id= | + | |entrez_id=126669 |
|gc_percent=0.771144 | |gc_percent=0.771144 | ||
|gene_alias=- | |gene_alias=- | ||
| − | |gene_description= | + | |gene_description=Src homology 2 domain containing E |
|gene_id=126669 | |gene_id=126669 | ||
|gene_name=Src homology 2 domain containing E | |gene_name=Src homology 2 domain containing E | ||
| Line 18: | Line 18: | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=HGNC:27004 | |hgnc_mgi_id=HGNC:27004 | ||
| − | |nearest_ensembl= | + | |nearest_ensembl=ENSG00000169291 |
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001010846 |
| − | |nearest_refseq= | + | |nearest_refseq=NM_001010846 |
| − | |nearest_unigene=Hs. | + | |nearest_unigene=Hs.591481 |
| − | |num_trans= | + | |num_trans=5 |
|species=human | |species=human | ||
|start=154502402 | |start=154502402 | ||
|start_of_center_position=154502425 | |start_of_center_position=154502425 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000304760. | + | |transcript_name=ENST00000304760.3 NM_001010846 NR_135169 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_14816.1 | |tss_id=hg_14816.1 | ||
Revision as of 10:46, 16 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 154502425 |
|---|---|
| End of the center position in the TSS region: | 154502426 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000304760.3 NM_001010846 NR_135169 |
|---|---|
| Distance: | 0 |
| Num_trans: | 5 |
| All_trans: | ENST00000304760.3:0 NM_001010846:0 NR_135169:0 BC117210:353 BC143765:354 |
TATA-Box annotation
| Distance to TSS: | -14 |
|---|---|
| Nearest PromoterID: | NM_001010846 |
| Entrez ID: | 126669 |
| Nearest Unigene: | Hs.591481 |
| Nearest Refseq: | NM_001010846 |
| Nearest Ensembl: | ENSG00000169291 |
| Gene Name: | Src homology 2 domain containing E |
| Gene Alias: | - |
| Gene Description: | Src homology 2 domain containing E |
| Gene Type: | protein-coding |
| CpG%: | 0.12 |
| GC%: | 0.771144 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
