Difference between revisions of "TSS:Hg 14884.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|SHCA= | |SHCA= | ||
| − | |all_trans=ENST00000368445.9:0 ENST00000448116. | + | |all_trans=ENST00000368445.9:0 ENST00000448116.7:0 ENST00000368449.8:0 NM_001130040:0 NM_183001:0 BC033925:0 BX647149:0 LP764910:0 LP764912:0 AK096169:0 BC011813:0 BC017283:0 AK296786:0 U73377:17 BX647136:26 AK225332:65 AB451255:211 AB451379:211 AB527815:211 |
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.03 | |cpg_percent=0.03 | ||
| Line 10: | Line 10: | ||
|entrez_id=6464 | |entrez_id=6464 | ||
|gc_percent=0.631841 | |gc_percent=0.631841 | ||
| − | |gene_alias=SHC | + | |gene_alias=SHC{{!}}SHCA |
|gene_description=SHC adaptor protein 1 | |gene_description=SHC adaptor protein 1 | ||
|gene_id=6464 | |gene_id=6464 | ||
| − | |gene_name=SHC | + | |gene_name=SHC adaptor protein 1 |
|gene_source=HGNC:10840 | |gene_source=HGNC:10840 | ||
|gene_symbol=SHC1 | |gene_symbol=SHC1 | ||
| Line 20: | Line 20: | ||
|hgnc_mgi_id=HGNC:10840 | |hgnc_mgi_id=HGNC:10840 | ||
|nearest_ensembl=ENSG00000160691 | |nearest_ensembl=ENSG00000160691 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_183001 |
|nearest_refseq=NM_003029 | |nearest_refseq=NM_003029 | ||
|nearest_unigene=Hs.433795 | |nearest_unigene=Hs.433795 | ||
| − | |num_trans= | + | |num_trans=19 |
|species=human | |species=human | ||
|start=154970736 | |start=154970736 | ||
|start_of_center_position=154970745 | |start_of_center_position=154970745 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000368445.9 ENST00000448116. | + | |transcript_name=ENST00000368445.9 ENST00000448116.7 ENST00000368449.8 NM_001130040 NM_183001 BC033925 BX647149 LP764910 LP764912 AK096169 BC011813 BC017283 AK296786 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_14884.1 | |tss_id=hg_14884.1 | ||
Revision as of 11:02, 16 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 154970745 |
|---|---|
| End of the center position in the TSS region: | 154970746 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000368445.9 ENST00000448116.7 ENST00000368449.8 NM_001130040 NM_183001 BC033925 BX647149 LP764910 LP764912 AK096169 BC011813 BC017283 AK296786 |
|---|---|
| Distance: | 0 |
| Num_trans: | 19 |
| All_trans: | ENST00000368445.9:0 ENST00000448116.7:0 ENST00000368449.8:0 NM_001130040:0 NM_183001:0 BC033925:0 BX647149:0 LP764910:0 LP764912:0 AK096169:0 BC011813:0 BC017283:0 AK296786:0 U73377:17 BX647136:26 AK225332:65 AB451255:211 AB451379:211 AB527815:211 |
TATA-Box annotation
| Distance to TSS: | 2 |
|---|---|
| Nearest PromoterID: | NM_183001 |
| Entrez ID: | 6464 |
| Nearest Unigene: | Hs.433795 |
| Nearest Refseq: | NM_003029 |
| Nearest Ensembl: | ENSG00000160691 |
| Gene Name: | SHC adaptor protein 1 |
| Gene Alias: | SHC|SHCA |
| Gene Description: | SHC adaptor protein 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.03 |
| GC%: | 0.631841 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
