Difference between revisions of "TSS:Hg 14890.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|SHCA= | |SHCA= | ||
| − | |all_trans=ENST00000412170.5 | + | |all_trans=ENST00000412170.5:0 X68148:0 BC014158:-17 AK130014:-28 ENST00000368453.8:-29 ENST00000368450.5:-29 NM_001202859:-29 NM_003029:-29 NM_001130041:-29 AK315842:-47 ENST00000366442.2:-48 LP764911:-136 LP764913:-136 AK292143:-136 |
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.055 | |cpg_percent=0.055 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=44 |
|end=154974347 | |end=154974347 | ||
|end_of_center_position=154974332 | |end_of_center_position=154974332 | ||
|entrez_id=6464 | |entrez_id=6464 | ||
|gc_percent=0.597015 | |gc_percent=0.597015 | ||
| − | |gene_alias=SHC | + | |gene_alias=SHC{{!}}SHCA |
|gene_description=SHC adaptor protein 1 | |gene_description=SHC adaptor protein 1 | ||
|gene_id=6464 | |gene_id=6464 | ||
| − | |gene_name=SHC | + | |gene_name=SHC adaptor protein 1 |
|gene_source=HGNC:10840 | |gene_source=HGNC:10840 | ||
|gene_symbol=SHC1 | |gene_symbol=SHC1 | ||
| Line 23: | Line 23: | ||
|nearest_refseq=NM_003029 | |nearest_refseq=NM_003029 | ||
|nearest_unigene=Hs.433795 | |nearest_unigene=Hs.433795 | ||
| − | |num_trans= | + | |num_trans=14 |
|species=human | |species=human | ||
|start=154974316 | |start=154974316 | ||
|start_of_center_position=154974331 | |start_of_center_position=154974331 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000412170.5 | + | |transcript_name=ENST00000412170.5 X68148 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_14890.1 | |tss_id=hg_14890.1 | ||
Revision as of 11:03, 16 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 154974331 |
|---|---|
| End of the center position in the TSS region: | 154974332 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000412170.5 X68148 |
|---|---|
| Distance: | 0 |
| Num_trans: | 14 |
| All_trans: | ENST00000412170.5:0 X68148:0 BC014158:-17 AK130014:-28 ENST00000368453.8:-29 ENST00000368450.5:-29 NM_001202859:-29 NM_003029:-29 NM_001130041:-29 AK315842:-47 ENST00000366442.2:-48 LP764911:-136 LP764913:-136 AK292143:-136 |
TATA-Box annotation
| Distance to TSS: | 44 |
|---|---|
| Nearest PromoterID: | NM_001130041 |
| Entrez ID: | 6464 |
| Nearest Unigene: | Hs.433795 |
| Nearest Refseq: | NM_003029 |
| Nearest Ensembl: | ENSG00000160691 |
| Gene Name: | SHC adaptor protein 1 |
| Gene Alias: | SHC|SHCA |
| Gene Description: | SHC adaptor protein 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.055 |
| GC%: | 0.597015 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
