Difference between revisions of "TSS:Hg 233185.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|SHCA= | |SHCA= | ||
| − | |all_trans= | + | |all_trans=BC070067:-5 BC099909:14 LP895725:14 ENST00000314835.5:25 NR_024117:-35 AK293928:-35 LF206171:-114 MA441748:-114 |
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
| − | |distance= | + | |distance=-5 |
|distance_to_tss=2128 | |distance_to_tss=2128 | ||
|end=154968619 | |end=154968619 | ||
| Line 10: | Line 10: | ||
|entrez_id=6464 | |entrez_id=6464 | ||
|gc_percent=0.597015 | |gc_percent=0.597015 | ||
| − | |gene_alias=SHC | + | |gene_alias=SHC{{!}}SHCA |
|gene_description=SHC adaptor protein 1 | |gene_description=SHC adaptor protein 1 | ||
| − | |gene_id= | + | |gene_id=55154 |
| − | |gene_name= | + | |gene_name=misato mitochondrial distribution and morphology regulator 1 |
| − | |gene_source=HGNC: | + | |gene_source=HGNC:29678 |
| − | |gene_symbol= | + | |gene_symbol=MSTO1 |
| − | |gene_synonyms= | + | |gene_synonyms=FLJ10504 LST005 MST misato |
|gene_type=protein-coding | |gene_type=protein-coding | ||
| − | |hgnc_mgi_id=HGNC: | + | |hgnc_mgi_id=HGNC:29678 |
|nearest_ensembl=ENSG00000160691 | |nearest_ensembl=ENSG00000160691 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_183001 |
|nearest_refseq=NM_003029 | |nearest_refseq=NM_003029 | ||
|nearest_unigene=Hs.433795 | |nearest_unigene=Hs.433795 | ||
| − | |num_trans= | + | |num_trans=8 |
|species=human | |species=human | ||
|start=154968618 | |start=154968618 | ||
|start_of_center_position=155745803 | |start_of_center_position=155745803 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=BC070067 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_233185.1 | |tss_id=hg_233185.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id= |
}} | }} | ||
Revision as of 12:41, 17 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 155745803 |
|---|---|
| End of the center position in the TSS region: | 155745804 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | BC070067 |
|---|---|
| Distance: | -5 |
| Num_trans: | 8 |
| All_trans: | BC070067:-5 BC099909:14 LP895725:14 ENST00000314835.5:25 NR_024117:-35 AK293928:-35 LF206171:-114 MA441748:-114 |
TATA-Box annotation
| Distance to TSS: | 2128 |
|---|---|
| Nearest PromoterID: | NM_183001 |
| Entrez ID: | 6464 |
| Nearest Unigene: | Hs.433795 |
| Nearest Refseq: | NM_003029 |
| Nearest Ensembl: | ENSG00000160691 |
| Gene Name: | misato mitochondrial distribution and morphology regulator 1 |
| Gene Alias: | SHC|SHCA |
| Gene Description: | SHC adaptor protein 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.597015 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
