Difference between revisions of "TSS:Hg 101706.1"
From referenceTSS
| Line 4: | Line 4: | ||
|CMSTA3= | |CMSTA3= | ||
|NET38= | |NET38= | ||
| − | |all_trans= | + | |all_trans=LF206456:0 MA442033:0 ENST00000476832.2:30 ENST00000238477.5:30 NR_024532:30 NM_033087:30 AK074988:30 AK075172:32 DQ570480:37 AB161356:51 AK027417:56 AK074704:56 BC017876:58 KJ895084:74 DQ891989:76 DQ895179:76 CU676096:77 LF354592:359 MA590169:359 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.075 | |cpg_percent=0.075 | ||
| − | |distance= | + | |distance=0 |
| − | |distance_to_tss=- | + | |distance_to_tss=-40 |
|end=99221992 | |end=99221992 | ||
|end_of_center_position=99221982 | |end_of_center_position=99221982 | ||
|entrez_id=85365 | |entrez_id=85365 | ||
|gc_percent=0.636816 | |gc_percent=0.636816 | ||
| − | |gene_alias=CDG1I | + | |gene_alias=CDG1I{{!}}CDGIi{{!}}CMS14{{!}}CMSTA3{{!}}NET38{{!}}hALPG2 |
| − | |gene_description= | + | |gene_description=ALG2 alpha-1,3/1,6-mannosyltransferase |
|gene_id=85365 | |gene_id=85365 | ||
| − | |gene_name= | + | |gene_name=ALG2 |
|gene_source=HGNC:23159 | |gene_source=HGNC:23159 | ||
|gene_symbol=ALG2 | |gene_symbol=ALG2 | ||
| Line 24: | Line 24: | ||
|hgnc_mgi_id=HGNC:23159 | |hgnc_mgi_id=HGNC:23159 | ||
|nearest_ensembl=ENSG00000119523 | |nearest_ensembl=ENSG00000119523 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_033087 |
|nearest_refseq=NM_033087 | |nearest_refseq=NM_033087 | ||
|nearest_unigene=Hs.40919 | |nearest_unigene=Hs.40919 | ||
| − | |num_trans= | + | |num_trans=19 |
|species=human | |species=human | ||
|start=99221971 | |start=99221971 | ||
|start_of_center_position=99221981 | |start_of_center_position=99221981 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=LF206456 MA442033 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_101706.1 | |tss_id=hg_101706.1 | ||
Latest revision as of 16:46, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 99221981 |
|---|---|
| End of the center position in the TSS region: | 99221982 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | LF206456 MA442033 |
|---|---|
| Distance: | 0 |
| Num_trans: | 19 |
| All_trans: | LF206456:0 MA442033:0 ENST00000476832.2:30 ENST00000238477.5:30 NR_024532:30 NM_033087:30 AK074988:30 AK075172:32 DQ570480:37 AB161356:51 AK027417:56 AK074704:56 BC017876:58 KJ895084:74 DQ891989:76 DQ895179:76 CU676096:77 LF354592:359 MA590169:359 |
TATA-Box annotation
| Distance to TSS: | -40 |
|---|---|
| Nearest PromoterID: | NM_033087 |
| Entrez ID: | 85365 |
| Nearest Unigene: | Hs.40919 |
| Nearest Refseq: | NM_033087 |
| Nearest Ensembl: | ENSG00000119523 |
| Gene Name: | ALG2 |
| Gene Alias: | CDG1I|CDGIi|CMS14|CMSTA3|NET38|hALPG2 |
| Gene Description: | ALG2 alpha-1,3/1,6-mannosyltransferase |
| Gene Type: | protein-coding |
| CpG%: | 0.075 |
| GC%: | 0.636816 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
