Difference between revisions of "TSS:Hg 243018.1"
From referenceTSS
| Line 4: | Line 4: | ||
|LY6LS= | |LY6LS= | ||
|MDM= | |MDM= | ||
| + | |all_trans=ENST00000636434.1:89 AK310471:89 BC030595:109 ENST00000374806.2:141 NM_147180:141 AF400667:141 AK057524:150 AK302547:150 BC066299:171 JF432717:180 KJ891875:180 AF085237:189 AF145026:189 | ||
|chr=chr8 | |chr=chr8 | ||
|cpg_percent=0.035 | |cpg_percent=0.035 | ||
| − | |distance= | + | |distance=89 |
| − | |distance_to_tss= | + | |distance_to_tss=1336 |
|end=142741075 | |end=142741075 | ||
|end_of_center_position=101595110 | |end_of_center_position=101595110 | ||
|entrez_id=57152 | |entrez_id=57152 | ||
|gc_percent=0.646766 | |gc_percent=0.646766 | ||
| − | |gene_alias=ANUP | + | |gene_alias=ANUP{{!}}ARS{{!}}ArsB{{!}}LY6-MT{{!}}LY6LS{{!}}MDM |
|gene_description=secreted LY6/PLAUR domain containing 1 | |gene_description=secreted LY6/PLAUR domain containing 1 | ||
| − | |gene_name= | + | |gene_id=5535 |
| + | |gene_name=protein phosphatase 3 regulatory subunit B, beta | ||
| + | |gene_source=HGNC:9318 | ||
| + | |gene_symbol=PPP3R2 | ||
| + | |gene_synonyms=PPP3RL | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:9318 | ||
|nearest_ensembl=ENSG00000126233 | |nearest_ensembl=ENSG00000126233 | ||
|nearest_promoter_id=NM_020427 | |nearest_promoter_id=NM_020427 | ||
|nearest_refseq=NM_020427 | |nearest_refseq=NM_020427 | ||
|nearest_unigene=Hs.103505 | |nearest_unigene=Hs.103505 | ||
| − | |num_trans= | + | |num_trans=13 |
|species=human | |species=human | ||
|start=142741064 | |start=142741064 | ||
|start_of_center_position=101595109 | |start_of_center_position=101595109 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=ENST00000636434.1 AK310471 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_243018.1 | |tss_id=hg_243018.1 | ||
|tss_score=1 | |tss_score=1 | ||
| + | |uniprot_id=A0A1B0GUC7 | ||
}} | }} | ||
Revision as of 16:29, 17 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 101595109 |
|---|---|
| End of the center position in the TSS region: | 101595110 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000636434.1 AK310471 |
|---|---|
| Distance: | 89 |
| Num_trans: | 13 |
| All_trans: | ENST00000636434.1:89 AK310471:89 BC030595:109 ENST00000374806.2:141 NM_147180:141 AF400667:141 AK057524:150 AK302547:150 BC066299:171 JF432717:180 KJ891875:180 AF085237:189 AF145026:189 |
TATA-Box annotation
| Distance to TSS: | 1336 |
|---|---|
| Nearest PromoterID: | NM_020427 |
| Entrez ID: | 57152 |
| Nearest Unigene: | Hs.103505 |
| Nearest Refseq: | NM_020427 |
| Nearest Ensembl: | ENSG00000126233 |
| Gene Name: | protein phosphatase 3 regulatory subunit B, beta |
| Gene Alias: | ANUP|ARS|ArsB|LY6-MT|LY6LS|MDM |
| Gene Description: | secreted LY6/PLAUR domain containing 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.035 |
| GC%: | 0.646766 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
